RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SPEM2Q0P670 501 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 KCNMA1Q12791 1236 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 UBE3CQ15386 1083 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 ZNF528Q3MIS6 628 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 USH1GQ495M9 461 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 FBXO47Q5MNV8 452 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 CELF3Q5SZQ8 465 aaKnown RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 ARHGEF16Q5VV41 709 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 IL31Q6EBC2 164 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 PHLDB3Q6NSJ2 640 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 KANK3Q6NY19 840 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 GIMAP6Q6P9H5 292 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 TMC5Q6UXY8 1006 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 TSHZ1Q6ZSZ6 1077 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 CCDC149Q6ZUS6 474 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 MAML2Q8IZL2 1156 aaPredicted RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 COLGALT1Q8NBJ5 622 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 DCAF4Q8WV16 495 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 MRPS27Q92552 414 aaKnown RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 TAAR1Q96RJ0 339 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 IWS1Q96ST2 819 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 RMDN3Q96TC7 470 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 FTHL17Q9BXU8 183 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 EPC1Q9H2F5 836 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 MLXIPQ9HAP2 919 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 IL1RAPL2Q9NP60 686 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 DLGAP2Q9P1A6 1054 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 IGSF9Q9P2J2 1179 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 RAB23Q9ULC3 237 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 LZTS1Q9Y250 596 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 SUPT16HQ9Y5B9 1047 aaKnown RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 PCDHB7Q9Y5E2 793 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 PCDHGC4Q9Y5F7 938 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 GTF3C3Q9Y5Q9 886 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 GREB1LQ9C091 1923 aaPredicted RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 MYH4Q9Y623 1939 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 PLIN4Q96Q06 1357 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 SERTM1A2A2V5 107 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 NOP56O00567 594 aaKnown RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 KHNYNO15037 678 aaKnown RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 TBC1D4O60343 1298 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 APPP05067 770 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 LAG3P18627 525 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 NOS2P35228 1153 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 TXLNAP40222 546 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 KRT17Q04695 432 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 RING1Q06587 406 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 UBAP2LQ14157 1087 aaKnown RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 SMC1AQ14683 1233 aaKnown RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 TEAD4Q15561 434 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 LPAL2Q16609 132 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 TAF2Q6P1X5 1199 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 BTNL9Q6UXG8 535 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 RTN4RL1Q86UN2 441 aaPredicted RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 ERC1Q8IUD2 1116 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 RGS22Q8NE09 1264 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 SYTL5Q8TDW5 730 aaPredicted RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 LMBR1Q8WVP7 490 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 RSAD2Q8WXG1 361 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 ARHGAP45Q92619 1136 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 STRBPQ96SI9 672 aaKnown RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 BCO2Q9BYV7 579 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 FOXQ1Q9C009 403 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 BOLA2Q9H3K6 86 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 C1orf115Q9H7X2 142 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 AGO3Q9H9G7 860 aaKnown RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 ARHGEF3Q9NR81 526 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 TYW1Q9NV66 732 aaKnown RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 DZANK1Q9NVP4 752 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 ZSCAN32Q9NX65 697 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 FBXO4Q9UKT5 387 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 EXOC6BQ9Y2D4 811 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 MAFBQ9Y5Q3 323 aaPredicted RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 CDY2AQ9Y6F7 541 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 FRMPD2Q68DX3 1309 aaPredicted RBP6.18□□□□□ -1.42
HERC1-213ENST00000561359 LOC400499M0QZD8 3231 aa6.18□□□□□ -1.42
HERC1-213ENST00000561359 DMXL2Q8TDJ6 3036 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 C2orf71A6NGG8 1288 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 TSPY2A6NKD2 308 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 SFI1A8K8P3 1242 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 NMT2O60551 498 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 CLASP2O75122 1294 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 LRRN2O75325 713 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 SLC3A2P08195 630 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 IFIT2P09913 472 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 SRFP11831 508 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 MYCLP12524 364 aaPredicted RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 GLULP15104 373 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 PSMA6P60900 246 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 CTBSQ01459 385 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 PLCB3Q01970 1234 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 MGAT3Q09327 533 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 BMS1Q14692 1282 aaKnown RBP6.17□□□□□ -1.42
HERC1-213ENST00000561359 FAM102BQ5T8I3 360 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 ZSCAN25Q6NSZ9 544 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 KCNV1Q6PIU1 500 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 DCLRE1AQ6PJP8 1040 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 CABP7Q86V35 215 aa6.17□□□□□ -1.42
HERC1-213ENST00000561359 FAM9BQ8IZU0 186 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms