RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FAM26FQ5R3K3 315 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 CENPPQ6IPU0 288 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 KSR1Q8IVT5 923 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 NME8Q8N427 588 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 DUSP9Q99956 384 aaKnown RBP18.21■□□□□ 0.51
TPM1-219ENST00000559397 C17orf75Q9HAS0 396 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 PARVGQ9HBI0 331 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 INTS13Q9NVM9 706 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.21■□□□□ 0.51
TPM1-219ENST00000559397 NOD1Q9Y239 953 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 COL4A3BPQ9Y5P4 624 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 BICDL2A1A5D9 508 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 LRRC10BA6NIK2 292 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 ESPNB1AK53 854 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 ASAP2O43150 1006 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 TBCAO75347 108 aaKnown RBP18.2■□□□□ 0.5
TPM1-219ENST00000559397 VTNP04004 478 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 PLS3P13797 630 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 FAAP100Q0VG06 881 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 LAMTOR4Q0VGL1 99 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 TPD52L1Q16890 204 aaPredicted RBP18.2■□□□□ 0.5
TPM1-219ENST00000559397 HSP90AA4PQ58FG1 418 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 RHPN2Q8IUC4 686 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 FIZ1Q96SL8 496 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 IMPACTQ9P2X3 320 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 AKT3Q9Y243 479 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 ZKSCAN5Q9Y2L8 839 aa18.2■□□□□ 0.5
TPM1-219ENST00000559397 TRIM49BA6NDI0 452 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 TLR3O15455 904 aaKnown RBP18.19■□□□□ 0.5
TPM1-219ENST00000559397 RPLP2P05387 115 aaKnown RBP18.19■□□□□ 0.5
TPM1-219ENST00000559397 PEX3P56589 373 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 MXD4Q14582 209 aaPredicted RBP18.19■□□□□ 0.5
TPM1-219ENST00000559397 CCDC186Q7Z3E2 898 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 IRF2BP1Q8IU81 584 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 MYCT1Q8N699 235 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
TPM1-219ENST00000559397 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 ZHX3Q9H4I2 956 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 THAP9Q9H5L6 903 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 LIMA1Q9UHB6 759 aaKnown RBP18.19■□□□□ 0.5
TPM1-219ENST00000559397 ATP11BQ9Y2G3 1177 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 ALPK3Q96L96 1907 aa18.19■□□□□ 0.5
TPM1-219ENST00000559397 A0A1B0GTH6 734 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 DCDC2CA8MYV0 355 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 GPR32O75388 356 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 GAP43P17677 238 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 NPTX2P47972 431 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 GPC3P51654 580 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 SPAG1Q07617 926 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 RBL2Q08999 1139 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 CAPSQ13938 189 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 HERC4Q5GLZ8 1057 aaPredicted RBP18.18■□□□□ 0.5
TPM1-219ENST00000559397 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 SFR1Q86XK3 245 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 SPIRE2Q8WWL2 714 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 NTPCRQ9BSD7 190 aaKnown RBP18.18■□□□□ 0.5
TPM1-219ENST00000559397 ADAMTS10Q9H324 1103 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 LARSQ9P2J5 1176 aaKnown RBP18.18■□□□□ 0.5
TPM1-219ENST00000559397 SEL1LQ9UBV2 794 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
TPM1-219ENST00000559397 NAMPTP43490 491 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 NLRP11P59045 1033 aaKnown RBP18.18■□□□□ 0.5
TPM1-219ENST00000559397 MGAT3Q09327 533 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 TMEM62Q0P6H9 643 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 NR1I3Q14994 352 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 ODR4Q5SWX8 454 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 VSTM4Q8IW00 320 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 GLIS3Q8NEA6 775 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 IFT74Q96LB3 600 aa18.18■□□□□ 0.5
TPM1-219ENST00000559397 CAND2O75155 1236 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 THPOP40225 353 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 MRPS6P82932 125 aaKnown RBP18.17■□□□□ 0.5
TPM1-219ENST00000559397 CDC42EP1Q00587 391 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 POU5F1BQ06416 359 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
TPM1-219ENST00000559397 PPP2R5AQ15172 486 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 TCP11X2Q5H9J9 407 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 RSPH3Q86UC2 560 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 MYOCDQ8IZQ8 938 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 RNF149Q8NC42 400 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 CAGE1Q8TC20 777 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 ZNF668Q96K58 619 aaPredicted RBP18.17■□□□□ 0.5
TPM1-219ENST00000559397 NLRP4Q96MN2 994 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 KCNF1Q9H3M0 494 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 IFT122Q9HBG6 1241 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 OLFML3Q9NRN5 406 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 KCNG1Q9UIX4 513 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 TBX21Q9UL17 535 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 SIP14410 1827 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 ADGRA3Q8IWK6 1321 aa18.17■□□□□ 0.5
TPM1-219ENST00000559397 A0A087WZ62 844 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 SRGAP2CP0DJJ0 459 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 MAPTP10636 758 aaKnown RBP18.16■□□□□ 0.5
TPM1-219ENST00000559397 CKBP12277 381 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 NCKAP1LP55160 1127 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 LRRC63Q05C16 580 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 KIZQ2M2Z5 673 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 FAM26DQ5JW98 314 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 CDCA2Q69YH5 1023 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms