RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CHORDC1Q9UHD1 332 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 PFASO15067 1338 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 RLFQ13129 1914 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 GTPBP10A4D1E9 387 aaKnown RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 MAP2K7O14733 419 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 LYPLA2O95372 231 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 ADSSP30520 456 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 SFNP31947 248 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 ACTR2P61160 394 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 PRKCEQ02156 737 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 ZNF746Q6NUN9 644 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 ZNF771Q7L3S4 317 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 HDXQ7Z353 690 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 XXYLT1Q8NBI6 393 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
TPM1-210ENST00000558264 OLIG1Q8TAK6 271 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 GOLGA5Q8TBA6 731 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 HNRNPLLQ8WVV9 542 aaKnown RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 PAGR1Q9BTK6 254 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 OSGEPQ9NPF4 335 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 KMT5AQ9NQR1 393 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 SNCAIPQ9Y6H5 919 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 IGSF9BQ9UPX0 1349 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 ZSCAN5CA6NGD5 496 aaPredicted RBP11.47□□□□□ -0.57
TPM1-210ENST00000558264 C19orf81C9J6K1 198 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 KCNK3O14649 394 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 PRKCIP41743 596 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 GTF2BQ00403 316 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
TPM1-210ENST00000558264 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 TERF2Q15554 542 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 WDR93Q6P2C0 686 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 GADL1Q6ZQY3 521 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 ANKRD35Q8N283 1001 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 TXLNBQ8N3L3 684 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 LMO3Q8TAP4 145 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 GPRASP2Q96D09 838 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 C12orf42Q96LP6 360 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 STK33Q9BYT3 514 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 SLC9A2Q9UBY0 812 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 ZHX1Q9UKY1 873 aaPredicted RBP11.47□□□□□ -0.57
TPM1-210ENST00000558264 TBX20Q9UMR3 447 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 PCDHGC5Q9Y5F6 944 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 ESYT3A0FGR9 886 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 FERP16591 822 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 GALCP54803 685 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 DMTNQ08495 405 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 MEI1Q5TIA1 1274 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 SLC9A9Q8IVB4 645 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 GPC2Q8N158 579 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 BTBD7Q9P203 1132 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 BZW2Q9Y6E2 419 aaKnown RBP11.47□□□□□ -0.57
TPM1-210ENST00000558264 KIAA1217Q5T5P2 1943 aa11.47□□□□□ -0.57
TPM1-210ENST00000558264 CALCAP01258 141 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 H2AFZP0C0S5 128 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 NCKAP1LP55160 1127 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 FAM193AP78312 1265 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 SNRNP35Q16560 246 aaKnown RBP11.46□□□□□ -0.57
TPM1-210ENST00000558264 TAF3Q5VWG9 929 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.57
TPM1-210ENST00000558264 SLC39A4Q6P5W5 647 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 H2AFVQ71UI9 128 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 INTS8Q75QN2 995 aaKnown RBP11.46□□□□□ -0.57
TPM1-210ENST00000558264 VPS36Q86VN1 386 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 TMEM143Q96AN5 459 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 CLMNQ96JQ2 1002 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 ZMYND15Q9H091 742 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 ELP3Q9H9T3 547 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 XPNPEP1Q9NQW7 623 aa11.46□□□□□ -0.57
TPM1-210ENST00000558264 ATP8B1O43520 1251 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 STBD1O95210 358 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 FDX1P10109 184 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 DLATP10515 647 aaKnown RBP11.46□□□□□ -0.58
TPM1-210ENST00000558264 LMNB1P20700 586 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 CNGA1P29973 690 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 TUBB4BP68371 445 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.58
TPM1-210ENST00000558264 ARHGEF26Q96DR7 871 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 BICD1Q96G01 975 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 TMEM117Q9H0C3 514 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.58
TPM1-210ENST00000558264 ERICH4A6NGS2 130 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 HNRNPDLO14979 420 aaKnown RBP11.45□□□□□ -0.58
TPM1-210ENST00000558264 PSAPP07602 524 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 PRLRP16471 622 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 MXI1P50539 228 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 SMTNP53814 917 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 GABPB1Q06547 395 aaPredicted RBP11.45□□□□□ -0.58
TPM1-210ENST00000558264 SUPT20HL1Q3ZLR7 823 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 CFAP221Q4G0U5 840 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 DAAM2Q86T65 1068 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 NCAPG2Q86XI2 1143 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms