RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 FZD8Q9H461 694 aa11.94□□□□□ -0.5
PABPN1-203ENST00000553960 RNPEPQ9H4A4 650 aa11.94□□□□□ -0.5
PABPN1-203ENST00000553960 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
PABPN1-203ENST00000553960 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
PABPN1-203ENST00000553960 EVPLQ92817 2033 aa11.94□□□□□ -0.5
PABPN1-203ENST00000553960 ADGRA3Q8IWK6 1321 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 K7ENM7 598 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 N4BP3O15049 544 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 ADAMTS4O75173 837 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 CABYRO75952 493 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 TMOD1P28289 359 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 HNRNPH3P31942 346 aaKnown RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 GTF2H1P32780 548 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 PURAQ00577 322 aaKnown RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 PRKCZQ05513 592 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 PTPN11Q06124 597 aaPredicted RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 FSCN1Q16658 493 aaKnown RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 VWA3BQ502W6 1294 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 ZC2HC1CQ53FD0 456 aaPredicted RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 MARCH8Q5T0T0 291 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 INTS8Q75QN2 995 aaKnown RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 NME8Q8N427 588 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 CCDC112Q8NEF3 446 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 PRPF31Q8WWY3 499 aaKnown RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 PANX2Q96RD6 677 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 TSEN34Q9BSV6 310 aaKnown RBP11.93□□□□□ -0.5
PABPN1-203ENST00000553960 PLCB1Q9NQ66 1216 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 GPRC5CQ9NQ84 441 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 MYO6Q9UM54 1294 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 GABRQQ9UN88 632 aa11.93□□□□□ -0.5
PABPN1-203ENST00000553960 DENND3A2RUS2 1198 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 SLC16A4O15374 487 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 DYNC1LI2O43237 492 aaPredicted RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 ZEB2O60315 1214 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 TRPA1O75762 1119 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 AKAP3O75969 853 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 EPB41P11171 864 aaKnown RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 GNAT1P11488 350 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 PROZP22891 400 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 ADSSP30520 456 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 CDK17Q00537 523 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 SP4Q02446 784 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 CACNB2Q08289 660 aaPredicted RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 KCNA1Q09470 495 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 LAMTOR4Q0VGL1 99 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 GRM1Q13255 1194 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 CAPSQ13938 189 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 KYAT1Q16773 422 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 MTHFD1LQ6UB35 978 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 SRGAP1Q7Z6B7 1085 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 USP37Q86T82 979 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 TRIM50Q86XT4 487 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 LRRC8AQ8IWT6 810 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 DRC7Q8IY82 874 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 XXYLT1Q8NBI6 393 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 SYN2Q92777 582 aaPredicted RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 SLC35C1Q96A29 364 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 MFSD14AQ96MC6 490 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 NAA15Q9BXJ9 866 aaKnown RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 ARHGAP39Q9C0H5 1083 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 NUCKS1Q9H1E3 243 aaKnown RBP11.92□□□□□ -0.5
PABPN1-203ENST00000553960 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 SPC25Q9HBM1 224 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 SIK3Q9Y2K2 1263 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 COQ4Q9Y3A0 265 aa11.92□□□□□ -0.5
PABPN1-203ENST00000553960 A0A0B4J269 797 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 K7ERI5 159 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 ACKR2O00590 384 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 TOM1L1O75674 476 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 TBC1D8O95759 1140 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 ADRB2P07550 413 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 RARBP10826 455 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 KLRC1P26715 233 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 CAP1Q01518 475 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 PPFIA1Q13136 1202 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 GRIK4Q16099 956 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 FKBP15Q5T1M5 1219 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 GJC2Q5T442 439 aaPredicted RBP11.91□□□□□ -0.5
PABPN1-203ENST00000553960 TAF2Q6P1X5 1199 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 KIAA0319LQ8IZA0 1049 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
PABPN1-203ENST00000553960 ASAP3Q8TDY4 903 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 VTI1AQ96AJ9 217 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 TRIM44Q96DX7 344 aaPredicted RBP11.91□□□□□ -0.5
PABPN1-203ENST00000553960 MTG1Q9BT17 334 aaPredicted RBP11.91□□□□□ -0.5
PABPN1-203ENST00000553960 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
PABPN1-203ENST00000553960 IFT122Q9HBG6 1241 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 PTPRHQ9HD43 1115 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 CAPN11Q9UMQ6 739 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 FRMD4BQ9Y2L6 1034 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 ZKSCAN5Q9Y2L8 839 aa11.91□□□□□ -0.5
PABPN1-203ENST00000553960 ABLIM1O14639 778 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 TEX33O43247 280 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 STX10O60499 249 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms