RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 CXCR5P32302 372 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 TNNT3P45378 269 aaPredicted RBP14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 CETN1Q12798 172 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 ALKBH5Q6P6C2 394 aaKnown RBP14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 OTUD6AQ7L8S5 288 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 XXYLT1Q8NBI6 393 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 RDH13Q8NBN7 331 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 HVCN1Q96D96 273 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 PSMB7Q99436 277 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 GPRC5CQ9NQ84 441 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 CYP39A1Q9NYL5 469 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 HSPBP1Q9NZL4 362 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 NENFQ9UMX5 172 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 NFASCO94856 1347 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 MAPK13O15264 365 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 EVI5O60447 810 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 STAM2O75886 525 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 FTCDO95954 541 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 PSAPP07602 524 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 KCNA2P16389 499 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 VAMP7P51809 220 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 SMTNP53814 917 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 NPEPPSP55786 919 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 DMP1Q13316 513 aaPredicted RBP14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 DRAP1Q14919 205 aaPredicted RBP14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 MEI1Q5TIA1 1274 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 TRMT1LQ7Z2T5 733 aaKnown RBP14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 CBWD1Q9BRT8 395 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 A1CFQ9NQ94 594 aaKnown RBP14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 HOXC10Q9NYD6 342 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 GABBR1Q9UBS5 961 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 RNF14Q9UBS8 474 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 AFG3L2Q9Y4W6 797 aa14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 MYH9P35579 1960 aaKnown RBP14.96□□□□□ -0.01
LDLRAD3-202ENST00000524419 EMSYQ7Z589 1322 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 GRID2IPA4D2P6 1211 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 SPDYE16A6NNV3 312 aaPredicted RBP14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 TISP43B9A030 160 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 LMNB1P20700 586 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 GNPTABQ3T906 1256 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 CFAP221Q4G0U5 840 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 SPATA4Q8NEY3 305 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 KIFAP3Q92845 792 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 JPH1Q9HDC5 661 aaPredicted RBP14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 INTUQ9ULD6 942 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
LDLRAD3-202ENST00000524419 CCDC169A6NNP5 214 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 P4HA2O15460 535 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 H2AFZP0C0S5 128 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 ACTN2P35609 894 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 ZSCAN26Q16670 478 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 H2AFVQ71UI9 128 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 ANO5Q75V66 913 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 U2AF1L4Q8WU68 220 aaKnown RBP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 CEP170P1Q96L14 293 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 SLC9A2Q9UBY0 812 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 A0A0G2JMZ2 1700 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 SBF1O95248 1867 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 DDX3XO00571 662 aaKnown RBP eCLIP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 RPS6KA5O75582 802 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 SYF2O95926 243 aaKnown RBP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 NOP2P46087 812 aaKnown RBP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 HIRAP54198 1017 aaPredicted RBP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 SH3D19Q5HYK7 790 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 AENQ8WTP8 325 aaKnown RBP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 TAF4BQ92750 862 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 VTI1AQ96AJ9 217 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 SELENOOQ9BVL4 669 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 CWC15Q9P013 229 aaKnown RBP14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 TBX20Q9UMR3 447 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 PAPPA2Q9BXP8 1791 aa14.94□□□□□ -0.02
LDLRAD3-202ENST00000524419 ZC3H4Q9UPT8 1303 aaKnown RBP14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 A0A0A6YYK5 440 aaPredicted RBP14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 A0A0U1RQG5 324 aaPredicted RBP14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 RGS20O76081 388 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 NPTX2P47972 431 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 DLG4P78352 724 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 PRKG1Q13976 671 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 GLE1Q53GS7 698 aaKnown RBP14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 LEKR1Q6ZMV7 388 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 MAP4K3Q8IVH8 894 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 TMEM161BQ8NDZ6 487 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 SPIRE2Q8WWL2 714 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 GPR88Q9GZN0 384 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 C17orf75Q9HAS0 396 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 KMT5AQ9NQR1 393 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 SMARCAL1Q9NZC9 954 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 SPATA31C2B4DYI2 1134 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 GRIN3BO60391 1043 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 RNF40O75150 1001 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 ZMYND10O75800 440 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 MATR3P43243 847 aaKnown RBP eCLIP14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 DNA2P51530 1060 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 PRKCEQ02156 737 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 ARHGAP44Q17R89 818 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 EPC2Q52LR7 807 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 SWSAP1Q6NVH7 229 aa14.93□□□□□ -0.02
LDLRAD3-202ENST00000524419 MIS18BP1Q6P0N0 1132 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms