RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 NOC4LQ9BVI4 516 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 TBCCD1Q9NVR7 557 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 TDRKHQ9Y2W6 561 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 CFAP69A5D8W1 941 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 CCDC188H7C350 402 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 PGRMC1O00264 195 aaKnown RBP12.92□□□□□ -0.34
SPIDR-217ENST00000522117 KCNQ3O43525 872 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 NDUFB5O43674 189 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 VDRP11473 427 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 CREB1P16220 341 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 RPS6KA1Q15418 735 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 C3orf62Q6ZUJ4 267 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 NELFCDQ8IXH7 590 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 PMM1Q92871 262 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 LBHD1Q9BQE6 289 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-217ENST00000522117 MLXIPLQ9NP71 852 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 FAM207AQ9NSI2 230 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-217ENST00000522117 FAIMQ9NVQ4 179 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 KLHL42Q9P2K6 505 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 HESX1Q9UBX0 185 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 KIF1AQ12756 1690 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 SSU72P8A0A1W2PR75 194 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 KANSL1LA0AUZ9 987 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 TMEM120BA0PK00 339 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 KRIT1O00522 736 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 RNASEH1O60930 286 aaKnown RBP12.92□□□□□ -0.34
SPIDR-217ENST00000522117 PSMG1O95456 288 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 TGFB3P10600 412 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 GNAT2P19087 354 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 KLRC3Q07444 240 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 BCL2A1Q16548 175 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 EARS2Q5JPH6 523 aaKnown RBP12.92□□□□□ -0.34
SPIDR-217ENST00000522117 SLC2A7Q6PXP3 512 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 TAOK1Q7L7X3 1001 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 CCDC65Q8IXS2 484 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 FAM133AQ8N9E0 248 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 PPFIBP2Q8ND30 876 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 DQX1Q8TE96 717 aaKnown RBP12.92□□□□□ -0.34
SPIDR-217ENST00000522117 WASF1Q92558 559 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 MIPEPQ99797 713 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 CUEDC2Q9H467 287 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 NLRC4Q9NPP4 1024 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 CLIC5Q9NZA1 410 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 UMODL1Q5DID0 1318 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
SPIDR-217ENST00000522117 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 HALP42357 657 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 MTIF2P46199 727 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 ITGA7Q13683 1181 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 EAPPQ56P03 285 aaPredicted RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 GRAMD4Q6IC98 578 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 TREML1Q86YW5 311 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 LSM14AQ8ND56 463 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 STX18Q9P2W9 335 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 CNOT7Q9UIV1 285 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 UTP11Q9Y3A2 253 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 RGPD2P0DJD1 1756 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 CBX6O95503 412 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 GH1P01241 217 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 IFNAR1P17181 557 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 USP11P51784 963 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 PDXDC1Q6P996 788 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 ZNF449Q6P9G9 518 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 SATL1Q86VE3 508 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 ST13P4Q8IZP2 240 aaPredicted RBP12.91□□□□□ -0.34
SPIDR-217ENST00000522117 MYO1HQ8N1T3 1032 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 GDAP1Q8TB36 358 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 ANKS1AQ92625 1134 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 SPO11Q9Y5K1 396 aa12.91□□□□□ -0.34
SPIDR-217ENST00000522117 SMIM31A0A1B0GVY4 71 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 DYTNA2CJ06 578 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 ZNF213O14771 459 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 SERPINB7O75635 380 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 MCCD1P59942 119 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 CYLC2Q14093 348 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 MPP2Q14168 576 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 VWA3BQ502W6 1294 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 KLHL35Q6PF15 583 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 DTX3LQ8TDB6 740 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 IGDCC4Q8TDY8 1250 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 SHISA4Q96DD7 197 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 SPOCK3Q9BQ16 436 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 STMN4Q9H169 189 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-217ENST00000522117 EPB41L1Q9H4G0 881 aa12.9□□□□□ -0.34
SPIDR-217ENST00000522117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.9□□□□□ -0.344e-7■■■■■ 38.1
SPIDR-217ENST00000522117 ZNF212Q9UDV6 495 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms