RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PCDHB6Q9Y5E3 794 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 ST20-MTHFSA0A0A6YYL1 179 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 STC2O76061 302 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 CFBP00751 764 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 C1SP09871 688 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 VSIG10L2P0DP72 767 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 TACR2P21452 398 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 ACRV1P26436 265 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 HIBADHP31937 336 aaKnown RBP4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 CD69Q07108 199 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 PPARAQ07869 468 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 TRIM25Q14258 630 aaKnown RBP4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 PDCD1Q15116 288 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 IGFL4Q6B9Z1 124 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 CCDC62Q6P9F0 684 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 CLRN3Q8NCR9 226 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 USP7Q93009 1102 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 HIST1H2AHQ96KK5 128 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 UIMC1Q96RL1 719 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 HIST1H2AJQ99878 128 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 C14orf93Q9H972 538 aaKnown RBP4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 MSL2Q9HCI7 577 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 TOPORSQ9NS56 1045 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 RCAN3Q9UKA8 241 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 SYNPO2Q9UMS6 1093 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 EDARQ9UNE0 448 aa4.88□□□□□ -1.63
HMGB1P29-201ENST00000505659 DAPK3O43293 454 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 IGSF3O75054 1194 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 SEC24DO94855 1032 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 LY86O95711 162 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 FSHBP01225 129 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 LPLP06858 475 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 HSD3B2P26439 372 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 KIR2DL3P43628 341 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 DHCR24Q15392 516 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 FAM214AQ32MH5 1076 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 CT83Q5H943 113 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 FAM111BQ6SJ93 734 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 Q6ZRM9 215 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 HDGFL2Q7Z4V5 671 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 C1orf210Q8IVY1 113 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 MSL3Q8N5Y2 521 aaKnown RBP4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 CDYL2Q8N8U2 506 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 PPP1R14CQ8TAE6 165 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 GAB3Q8WWW8 586 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 OSBPL6Q9BZF3 934 aa4.87□□□□□ -1.63
HMGB1P29-201ENST00000505659 AKAP8O43823 692 aaKnown RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 RAB11FIP3O75154 756 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 ALDH1A2O94788 518 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 JUNP05412 331 aaKnown RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 MASP1P48740 699 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 SCNN1GP51170 649 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 HHEXQ03014 270 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 MGAT5Q09328 741 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 FOXE3Q13461 319 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 ELAVL1Q15717 326 aaKnown RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 PITRM1Q5JRX3 1037 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 FRMD7Q6ZUT3 714 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 LHFPL2Q6ZUX7 228 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 DDX46Q7L014 1031 aaKnown RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 SLC41A1Q8IVJ1 513 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 CMIPQ8IY22 773 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 ELOA2Q8IYF1 753 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 SLC16A11Q8NCK7 471 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 ZNF503Q96F45 646 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 TCF25Q9BQ70 676 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 FAM126AQ9BYI3 521 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 ZNF341Q9BYN7 854 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 IFT22Q9H7X7 185 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 VTA1Q9NP79 307 aa4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 EVLQ9UI08 416 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 NOC2LQ9Y3T9 749 aaKnown RBP4.86□□□□□ -1.63
HMGB1P29-201ENST00000505659 NPIPB8E9PQR5 432 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 FSBPO95073 299 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 RRP1BQ14684 758 aaKnown RBP4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 FKBP15Q5T1M5 1219 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 RASSF3Q86WH2 238 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 UNC5BQ8IZJ1 945 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 CMTM4Q8IZR5 234 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 AFAP1L2Q8N4X5 818 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 MB21D1Q8N884 522 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 PGBD4Q96DM1 585 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 TTC1Q99614 292 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 SLKQ9H2G2 1235 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 KCTD10Q9H3F6 313 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 CAAP1Q9H8G2 361 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 PRSS50Q9UI38 385 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 GIT1Q9Y2X7 761 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 NUMBLQ9Y6R0 609 aa4.85□□□□□ -1.63
HMGB1P29-201ENST00000505659 A0A1W2PR48 441 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 MAFGO15525 162 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 MTSS1O43312 755 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 TMEM127O75204 238 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 CASRP41180 1078 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 PTH1RQ03431 593 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 CRHR2Q13324 411 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 SPIDRQ14159 915 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 MAN2A1Q16706 1144 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 TAF7LQ5H9L4 462 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms