RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CCDC188H7C350 402 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 M0R2N6 131 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 MYL1P05976 194 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 UBTFL6P0CB48 400 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 NEFHP12036 1026 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 GM2AP17900 193 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 TNFAIP3P21580 790 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 GNA11P29992 359 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 RFC4P35249 363 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 CHKAP35790 457 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 BTDP43251 543 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 SSR1P43307 286 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 PAPOLAP51003 745 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 KLRC3Q07444 240 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 OVGP1Q12889 678 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 SEMA3FQ13275 785 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 COG2Q14746 738 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 TMED2Q15363 201 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 GRIPAP1Q4V328 841 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ZC2HC1CQ53FD0 456 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ANO7Q6IWH7 933 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ZDHHC24Q6UX98 284 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 TPTE2Q6XPS3 522 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 KCTD1Q719H9 257 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ZDHHC14Q8IZN3 488 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 LNX1Q8TBB1 728 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 SLC20A1Q8WUM9 679 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 AK8Q96MA6 479 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 SH2D3AQ9BRG2 576 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 BSDC1Q9NW68 430 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 MTRF1LQ9UGC7 380 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.2□□□□□ -1.14e-7■■■■■ 41
NEDD9-208ENST00000504387 RBAK-RBAKDNI3L0D1 243 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ZBTB39O15060 712 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 KIAA0391O15091 583 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ASAP2O43150 1006 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 CHMP2AO43633 222 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 PPFIA2O75334 1257 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ETS2P15036 469 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 STAT1P42224 750 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 RCAN1P53805 252 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ZC3H18Q86VM9 953 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ECHDC2Q86YB7 292 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 CCDC65Q8IXS2 484 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 C4orf33Q8N1A6 199 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 PIGOQ8TEQ8 1089 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 DNAJC19Q96DA6 116 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 MYLK2Q9H1R3 596 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 CUEDC2Q9H467 287 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ATP8A2Q9NTI2 1148 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 DDX25Q9UHL0 483 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 COG5Q9UP83 839 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ALG6Q9Y672 507 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 PFASO15067 1338 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 CFAP73A6NFT4 308 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 RIPK2O43353 540 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 SPOPO43791 374 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 AFPP02771 609 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 CACNB3P54284 484 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ADCY2Q08462 1091 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 DRAP1Q14919 205 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 LRRC36Q1X8D7 754 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 C6orf118Q5T5N4 469 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 PHC3Q8NDX5 983 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 MAGEC3Q8TD91 643 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 UTP4Q969X6 686 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 NGLY1Q96IV0 654 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 FAM84AQ96KN4 292 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 IFT74Q96LB3 600 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 CDC42EP4Q9H3Q1 356 aaKnown RBP8.2□□□□□ -1.1
NEDD9-208ENST00000504387 BATF3Q9NR55 127 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 HOMER3Q9NSC5 361 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 ZDHHC18Q9NUE0 388 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 AIPL1Q9NZN9 384 aa8.2□□□□□ -1.1
NEDD9-208ENST00000504387 PVALEFA0A1B0GWK0 134 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 PAEPP09466 180 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 CPA2P48052 419 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 GNAQP50148 359 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 EIF3BP55884 814 aaKnown RBP8.19□□□□□ -1.1
NEDD9-208ENST00000504387 CALCOCO2Q13137 446 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 MAPK7Q13164 816 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 BLMHQ13867 455 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 RCN2Q14257 317 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 ITIH4Q14624 930 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 USH1GQ495M9 461 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 MDH1BQ5I0G3 518 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 DUPD1Q68J44 220 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 RFWD3Q6PCD5 774 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 DPP8Q6V1X1 898 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-208ENST00000504387 TAOK1Q7L7X3 1001 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 CCNJLQ8IV13 435 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 KLF6Q99612 283 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-208ENST00000504387 KIAA1683Q9H0B3 1180 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 PCIF1Q9H4Z3 704 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 SLITRK6Q9H5Y7 841 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.19□□□□□ -1.1
NEDD9-208ENST00000504387 NID2Q14112 1375 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 PKD1L3Q7Z443 1732 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms