RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 NFX1Q12986 1120 aaKnown RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ALCAMQ13740 583 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 PPP2R5DQ14738 602 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 MAPK6Q16659 721 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 PDXDC1Q6P996 788 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 KLHL29Q96CT2 875 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ANKRD36BP1Q96IX9 119 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 SMC6Q96SB8 1091 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 MTRQ99707 1265 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 PGRMC1O00264 195 aaKnown RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ADCY8P40145 1251 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ACOT2P49753 483 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 GMCL1Q96IK5 515 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 IDI2Q9BXS1 227 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 INTS2Q9H0H0 1204 aaKnown RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ACTR5Q9H9F9 607 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 KLHL14Q9P2G3 628 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 HESX1Q9UBX0 185 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ZNF148Q9UQR1 794 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ITIH6Q6UXX5 1313 aa12.15□□□□□ -0.47
SMPD4-218ENST00000482171 FOXR1Q6PIV2 292 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 KCNK18Q7Z418 384 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 PSPC1Q8WXF1 523 aaKnown RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 ANKS1AQ92625 1134 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 UNC45AQ9H3U1 944 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 RAB20Q9NX57 234 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 ABT1Q9ULW3 272 aaKnown RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 STAM2O75886 525 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 BMP6P22004 513 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 TRIM65Q6PJ69 517 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 TMEM270Q6UE05 265 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 MCUR1Q96AQ8 359 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 MMP19Q99542 508 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 HPCAL4Q9UM19 191 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 HMGB1P1B2RPK0 211 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 FAM86B1E9PN63 330 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 TFRCP02786 760 aaKnown RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 FAM86B2P0C5J1 330 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 FDX1P10109 184 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 VCAM1P19320 739 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 STAT5BP51692 787 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 PLTPP55058 493 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 TTI2Q6NXR4 508 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 GJB7Q6PEY0 223 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 FAM149B1Q96BN6 582 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 LRRIQ3A6PVS8 624 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 ICAM1P05362 532 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 TXNP10599 105 aaKnown RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 SREBF1P36956 1147 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 DYNLT1P63172 113 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 FUT2Q10981 343 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 TRIP13Q15645 432 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 ZNF568Q3ZCX4 644 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 C15orf52Q6ZUT6 534 aaKnown RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 RPUSD2Q8IZ73 545 aaKnown RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 SCYL3Q8IZE3 742 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 SPATA4Q8NEY3 305 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
SMPD4-218ENST00000482171 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
SMPD4-218ENST00000482171 ZBTB39O15060 712 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 MEFVO15553 781 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 KRT14P02533 472 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 RPS12P25398 132 aaKnown RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 CASP4P49662 377 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 CROCCP2Q86T23 111 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 CCDC89Q8N998 374 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 RNF149Q8NC42 400 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 WHAMMQ8TF30 809 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 MED10Q9BTT4 135 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 GOLPH3Q9H4A6 298 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 KLC4Q9NSK0 619 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 ANO9A1A5B4 782 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 C19orf81C9J6K1 198 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 FGGP02679 453 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 UCHL3P15374 230 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 KRT15P19012 456 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 TAF12Q16514 161 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 MUM1Q2TAK8 710 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 CDR2LQ86X02 465 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 OSBPL9Q96SU4 736 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 RPF1Q9H9Y2 349 aaKnown RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 EIF4E1BA6NMX2 242 aaKnown RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 EIF3HO15372 352 aaKnown RBP eCLIP12.13□□□□□ -0.474e-7■□□□□ 8.8
SMPD4-218ENST00000482171 RNF8O76064 485 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 ZRANB2O95218 330 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 POLR2BP30876 1174 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms