RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ERMNQ8TAM6 284 aa14.07□□□□□ -0.16
CCNL1-216ENST00000475298 PIGOQ8TEQ8 1089 aa14.07□□□□□ -0.16
CCNL1-216ENST00000475298 ALS2CR12Q96Q35 445 aa14.07□□□□□ -0.16
CCNL1-216ENST00000475298 PLCD4Q9BRC7 762 aa14.07□□□□□ -0.16
CCNL1-216ENST00000475298 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCNL1-216ENST00000475298 LMCD1Q9NZU5 365 aa14.07□□□□□ -0.16
CCNL1-216ENST00000475298 HDAC9Q9UKV0 1011 aa14.07□□□□□ -0.16
CCNL1-216ENST00000475298 A0A087X0T9 212 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 DPPA5A6NC42 116 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 PJA2O43164 708 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 GNA14O95837 355 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 CFBP00751 764 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 SERPING1P05155 500 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 FAM228BP0C875 321 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 GCLCP48506 637 aaPredicted RBP14.06□□□□□ -0.16
CCNL1-216ENST00000475298 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
CCNL1-216ENST00000475298 FKBP1AP62942 108 aaKnown RBP14.06□□□□□ -0.16
CCNL1-216ENST00000475298 LAMB3Q13751 1172 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 CTTNQ14247 550 aaKnown RBP14.06□□□□□ -0.16
CCNL1-216ENST00000475298 GNPTABQ3T906 1256 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 KLHDC7AQ5VTJ3 777 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 CCDC174Q6PII3 467 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 ZC3H3Q8IXZ2 948 aaKnown RBP14.06□□□□□ -0.16
CCNL1-216ENST00000475298 KLHL23Q8NBE8 558 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 PRCCQ92733 491 aaPredicted RBP14.06□□□□□ -0.16
CCNL1-216ENST00000475298 EIF2AK1Q9BQI3 630 aaKnown RBP14.06□□□□□ -0.16
CCNL1-216ENST00000475298 EDEM3Q9BZQ6 932 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 GANQ9H2C0 597 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 ADAMTS1Q9UHI8 967 aa14.06□□□□□ -0.16
CCNL1-216ENST00000475298 EIF4E1BA6NMX2 242 aaKnown RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 CLIC2O15247 247 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 HOXA7P31268 230 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 CASP4P49662 377 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ALDH5A1P51649 535 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ZYXQ15942 572 aaKnown RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 KNOP1Q1ED39 458 aaKnown RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 CFAP221Q4G0U5 840 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 DCAF17Q5H9S7 520 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ANKRD20A2Q5SQ80 823 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ANKRD20A1Q5TYW2 823 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ANKRD20A3Q5VUR7 823 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 CDAN1Q8IWY9 1227 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 RPUSD2Q8IZ73 545 aaKnown RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 CHMP6Q96FZ7 201 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ZNF317Q96PQ6 595 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 KRT12Q99456 494 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 TSC22D3Q99576 134 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 EPAS1Q99814 870 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 WDR18Q9BV38 432 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 OSBPL1AQ9BXW6 950 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ARHGEF10LQ9HCE6 1279 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 NOVA2Q9UNW9 492 aaKnown RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 RBAK-RBAKDNI3L0D1 243 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 TBX3O15119 743 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 PLSCR1O15162 318 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 COQ9O75208 318 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 AKAP3O75969 853 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 KIF4AO95239 1232 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 FTCDO95954 541 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 FOSP01100 380 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 NQO1P15559 274 aaKnown RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 CCND1P24385 295 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 KLRC1P26715 233 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 CCNG1P51959 295 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 EDRF1Q3B7T1 1238 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ERMARDQ5T6L9 678 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 AGBL2Q5U5Z8 902 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 EPM2AIP1Q7L775 607 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 TRIM74Q86UV6 250 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 TRIM73Q86UV7 250 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 GALNT15Q8N3T1 639 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 NOX5Q96PH1 765 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 PIDD1Q9HB75 910 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 LRRC4CQ9HCJ2 640 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 PACSIN2Q9UNF0 486 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ATRNL1Q5VV63 1379 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 ASTN1O14525 1302 aa14.05□□□□□ -0.16
CCNL1-216ENST00000475298 IGLV3-22A0A075B6J6 115 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 PALMO75781 387 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 GCNT3O95395 438 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 MYBL1P10243 752 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 CIITAP33076 1130 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 KLHL30Q0D2K2 578 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 ODF2Q5BJF6 829 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 STYK1Q6J9G0 422 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 PIGWQ7Z7B1 504 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 KSR1Q8IVT5 923 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 MDM1Q8TC05 714 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 ARMCX3Q9UH62 379 aaPredicted RBP14.04□□□□□ -0.16
CCNL1-216ENST00000475298 RABGAP1Q9Y3P9 1069 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 A8MUI8 341 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 RAD51CO43502 376 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 ENTPD3O75355 529 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
CCNL1-216ENST00000475298 STAT2P52630 851 aa14.04□□□□□ -0.16
CCNL1-216ENST00000475298 MAGOHP61326 146 aaKnown RBP14.04□□□□□ -0.16
CCNL1-216ENST00000475298 FAM133BQ5BKY9 247 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms