RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 PPP3CAQ08209 521 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 MAP3K12Q12852 859 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 ADRM1Q16186 407 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 C19orf54Q5BKX5 351 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 FAM102BQ5T8I3 360 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 MBNL2Q5VZF2 373 aaKnown RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 TRMT10BQ6PF06 316 aaKnown RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 BTNL9Q6UXG8 535 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 CLEC14AQ86T13 490 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 ZNF761Q86XN6 746 aaPredicted RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 PRR18Q8N4B5 295 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 KLHL36Q8N4N3 616 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 TXNDC5Q8NBS9 432 aaKnown RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 HOXB13Q92826 284 aaPredicted RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 TSR2Q969E8 191 aaKnown RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 FATE1Q969F0 183 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 DYDC2Q96IM9 177 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 SMAD5Q99717 465 aaKnown RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 NOL10Q9BSC4 688 aaKnown RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 QRSL1Q9H0R6 528 aaKnown RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 AASDHPPTQ9NRN7 309 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 ZIM2Q9NZV7 527 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 NTMQ9P121 344 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 SAE1Q9UBE0 346 aaPredicted RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 DPP7Q9UHL4 492 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 ZNF180Q9UJW8 692 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 EDARQ9UNE0 448 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 ANKRD6Q9Y2G4 727 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 GIT1Q9Y2X7 761 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 CTDP1Q9Y5B0 961 aaPredicted RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 ST20-MTHFSA0A0A6YYL1 179 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 A0A1B0GTL3 188 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 PMS2P1A4D2B8 440 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 C2orf78A6NCI8 922 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 RFXAPO00287 272 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 PRPF3O43395 683 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 NOBOXO60393 691 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 NRP2O60462 931 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 TMEM127O75204 238 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 NDUFS2O75306 463 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 SNUPNO95149 360 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 LY86O95711 162 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 SCGB1D2O95969 90 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 GAAP10253 952 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 VCAM1P19320 739 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 LPOP22079 712 aaPredicted RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 EDNRBP24530 442 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 MCAMP43121 646 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 AFF3P51826 1226 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 SLURP1P55000 103 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 SESN2P58004 480 aaPredicted RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 ADAM8P78325 824 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 MEF2AQ02078 507 aaPredicted RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 HGFACQ04756 655 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 CD69Q07108 199 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 PPARAQ07869 468 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 MALLQ13021 153 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 GTF2H3Q13889 308 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 NFYCQ13952 458 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 SPIDRQ14159 915 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 PPP2R5AQ15172 486 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 MAN2A1Q16706 1144 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 ZXDCQ2QGD7 858 aaPredicted RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 EFCAB2Q5VUJ9 269 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 CXorf57Q6NSI4 855 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 B3GNT9Q6UX72 402 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 TAS1R1Q7RTX1 841 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 FMNL3Q8IVF7 1028 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 TMEM151BQ8IW70 566 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 AMOTL1Q8IY63 956 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 CHPFQ8IZ52 775 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 UNC5BQ8IZJ1 945 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 ADGRG2Q8IZP9 1017 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 PIK3C3Q8NEB9 887 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 WDR48Q8TAF3 677 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 ADAMTS17Q8TE56 1095 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 JPH3Q8WXH2 748 aaPredicted RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 LPPQ93052 612 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 GFM2Q969S9 779 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 COA7Q96BR5 231 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 HSPBAP1Q96EW2 488 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 BORCS6Q96GS4 357 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 PAWRQ96IZ0 340 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 HIST1H2AHQ96KK5 128 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 C8orf48Q96LL4 319 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 WDR92Q96MX6 357 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 AIFM3Q96NN9 605 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 SLC2A13Q96QE2 648 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 HIST1H2AJQ99878 128 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 CARD11Q9BXL7 1154 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 TMEM168Q9H0V1 697 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 SLC12A5Q9H2X9 1139 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 GREM2Q9H772 168 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 L2HGDHQ9H9P8 463 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 LUC7LQ9NQ29 371 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 POLR3BQ9NW08 1133 aaPredicted RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 GEMIN8Q9NWZ8 242 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 IP6K2Q9UHH9 426 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 TCEAL9Q9UHQ7 104 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 SYNPO2Q9UMS6 1093 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms