RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SCOCQ9UIL1 159 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 G3BP2Q9UN86 482 aaKnown RBP6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 DUSP10Q9Y6W6 482 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 KLHL33A6NCF5 533 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 B4GALT4O60513 344 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 RAB27AP51159 221 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 CCT2P78371 535 aaKnown RBP6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 MGAT5Q09328 741 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 ACAP1Q15027 740 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 CLUL1Q15846 466 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 USP30Q70CQ3 517 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 RALYLQ86SE5 291 aaKnown RBP6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 CLEC14AQ86T13 490 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 FEZF2Q8TBJ5 459 aa6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 GFM2Q969S9 779 aaKnown RBP6.07□□□□□ -1.44
HMGB3P6-201ENST00000444896 AKAP10O43572 662 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 NRP2O60462 931 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 TMEM127O75204 238 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 ZRANB2O95218 330 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 C5AR1P21730 350 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 XPAP23025 273 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 MEOX1P50221 254 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 EPHB1P54762 984 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 SESN2P58004 480 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 HGFACQ04756 655 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 NFYCQ13952 458 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 ADRM1Q16186 407 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 RNF151Q2KHN1 245 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 ANO4Q32M45 955 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 ZMAT1Q5H9K5 638 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 TEKT5Q96M29 485 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 XYLT2Q9H1B5 865 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 OR10A2Q9H208 303 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 AASDHPPTQ9NRN7 309 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 TUBD1Q9UJT1 453 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 SLC4A7Q9Y6M7 1214 aa6.06□□□□□ -1.44
HMGB3P6-201ENST00000444896 OTOL1A6NHN0 477 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 MATN2O00339 956 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 XPOTO43592 962 aaKnown RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 ABLIM3O94929 683 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 FSBPO95073 299 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 CNOT4O95628 575 aaKnown RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 CCND1P24385 295 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 RECQLP46063 649 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 SLC5A3P53794 718 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 NRG3P56975 720 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 ADAM8P78325 824 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 ACAP2Q15057 778 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 MAN2A1Q16706 1144 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 MBNL2Q5VZF2 373 aaKnown RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 ABHD15Q6UXT9 468 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 TAS1R1Q7RTX1 841 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 PNMA8AQ86V59 439 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 UNC5BQ8IZJ1 945 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 CPA6Q8N4T0 437 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 PLA2G15Q8NCC3 412 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 JDP2Q8WYK2 163 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 SSH1Q8WYL5 1049 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 CFHR4Q92496 578 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 FATE1Q969F0 183 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 RTFDC1Q9BY42 306 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 ACE2Q9BYF1 805 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 TCF7L1Q9HCS4 588 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 INVSQ9Y283 1065 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 EID1Q9Y6B2 187 aa6.05□□□□□ -1.44
HMGB3P6-201ENST00000444896 ARHGAP6O43182 974 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 NDUFS2O75306 463 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 SNUPNO95149 360 aaKnown RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 ADCY7P51828 1080 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 CTSWP56202 376 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 ATP2C1P98194 919 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 PPP3CAQ08209 521 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 UBE3CQ15386 1083 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 NFE2Q16621 373 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 TMEM240Q5SV17 173 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 EFCAB2Q5VUJ9 269 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 BORAQ6PGQ7 559 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 LMBR1LQ6UX01 489 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 BTNL9Q6UXG8 535 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 GLB1L2Q8IW92 636 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 CMTR2Q8IYT2 770 aaKnown RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 LGI4Q8N135 537 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 MSL3Q8N5Y2 521 aaKnown RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 RHOBTB2Q9BYZ6 727 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 METTL14Q9HCE5 456 aaKnown RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 IP6K2Q9UHH9 426 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 FAM184BQ9ULE4 1060 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 LUC7L2Q9Y383 392 aaKnown RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 RBM8AQ9Y5S9 174 aaKnown RBP6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 MRFAP1Q9Y605 127 aa6.04□□□□□ -1.44
HMGB3P6-201ENST00000444896 DAPK3O43293 454 aa6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 CTSSP25774 331 aa6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 KIR2DL3P43628 341 aa6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 PPP2CBP62714 309 aa6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 PPP2CAP67775 309 aa6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 PIN1Q13526 163 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 LRRC41Q15345 812 aa6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 PPM1NQ8N819 430 aa6.03□□□□□ -1.44
HMGB3P6-201ENST00000444896 GLB1L3Q8NCI6 653 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms