RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 POLLQ9UGP5 575 aa18.95■□□□□ 0.62
SNED1-204ENST00000401884 AKT3Q9Y243 479 aa18.95■□□□□ 0.62
SNED1-204ENST00000401884 VEGFAP15692 232 aaPredicted RBP18.94■□□□□ 0.62
SNED1-204ENST00000401884 MARK3P27448 753 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 MSH2P43246 934 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 TMEM35BQ8NCS4 154 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 SYN2Q92777 582 aaPredicted RBP18.94■□□□□ 0.62
SNED1-204ENST00000401884 RNF25Q96BH1 459 aaPredicted RBP18.94■□□□□ 0.62
SNED1-204ENST00000401884 DCPSQ96C86 337 aaKnown RBP18.94■□□□□ 0.62
SNED1-204ENST00000401884 ARHGAP20Q9P2F6 1191 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 ENTPD3O75355 529 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 SH3RF1Q7Z6J0 888 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 PDIK1LQ8N165 341 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.94■□□□□ 0.621e-6■■■■■ 61.9
SNED1-204ENST00000401884 PCDHA10Q9Y5I2 948 aa18.94■□□□□ 0.62
SNED1-204ENST00000401884 RXRBP28702 533 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 HERVK_113P62684 666 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 GEN1Q17RS7 908 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 PAPD7Q5XG87 772 aaKnown RBP18.93■□□□□ 0.62
SNED1-204ENST00000401884 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 NLRP14Q86W24 1093 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 WNT8AQ9H1J5 351 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 DMGDHQ9UI17 866 aaKnown RBP18.93■□□□□ 0.62
SNED1-204ENST00000401884 NOD1Q9Y239 953 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 RAD51CO43502 376 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 SRLQ86TD4 932 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 SYT2Q8N9I0 419 aaPredicted RBP18.93■□□□□ 0.62
SNED1-204ENST00000401884 RIOX1Q9H6W3 641 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 SSX2IPQ9Y2D8 614 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 TNS2Q63HR2 1409 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 A6NJR5 290 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 SLC26A4O43511 780 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 ZNF772Q68DY9 489 aaPredicted RBP18.93■□□□□ 0.62
SNED1-204ENST00000401884 CCDC125Q86Z20 511 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 CALR3Q96L12 384 aaKnown RBP18.93■□□□□ 0.62
SNED1-204ENST00000401884 PSD3Q9NYI0 1048 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 LRRC10BA6NIK2 292 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 MED7O43513 233 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 TJP3O95049 919 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 SESTD1Q86VW0 696 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 C7orf31Q8N865 590 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 KCTD6Q8NC69 237 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 PYROXD1Q8WU10 500 aa18.93■□□□□ 0.62
SNED1-204ENST00000401884 RIMS1Q86UR5 1692 aaKnown RBP18.92■□□□□ 0.62
SNED1-204ENST00000401884 YWHABP31946 246 aaKnown RBP18.92■□□□□ 0.62
SNED1-204ENST00000401884 STXBP2Q15833 593 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 DDX42Q86XP3 938 aaKnown RBP eCLIP18.92■□□□□ 0.62
SNED1-204ENST00000401884 SRRM1Q8IYB3 904 aaKnown RBP18.92■□□□□ 0.62
SNED1-204ENST00000401884 WRNIP1Q96S55 665 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 SAYSD1Q9NPB0 183 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 INTS13Q9NVM9 706 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 NAGPAQ9UK23 515 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.92■□□□□ 0.62
SNED1-204ENST00000401884 SYNJ2BP-COX16A0A087WUM0 186 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 CYTH3O43739 400 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 DHX34Q14147 1143 aaKnown RBP18.92■□□□□ 0.62
SNED1-204ENST00000401884 SURF1Q15526 300 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 OR6B2Q6IFH4 312 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 CENPUQ71F23 418 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 APOL6Q9BWW8 343 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 MLXIPLQ9NP71 852 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 COX16Q9P0S2 106 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 MED24O75448 989 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 NME8Q8N427 588 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 C1orf54Q8WWF1 131 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 MT-ND3P03897 115 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 USP38Q8NB14 1042 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 ZIM3Q96PE6 472 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 HSPBP1Q9NZL4 362 aa18.92■□□□□ 0.62
SNED1-204ENST00000401884 TTC7AQ9ULT0 858 aaPredicted RBP18.92■□□□□ 0.62
SNED1-204ENST00000401884 TFRCP02786 760 aaKnown RBP18.91■□□□□ 0.62
SNED1-204ENST00000401884 IRAK1P51617 712 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 DARS2Q6PI48 645 aaKnown RBP18.91■□□□□ 0.62
SNED1-204ENST00000401884 TBC1D1Q86TI0 1168 aaPredicted RBP18.91■□□□□ 0.62
SNED1-204ENST00000401884 KIAA0895Q8NCT3 520 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 MORC4Q8TE76 937 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 TRIM51Q9BSJ1 452 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 MKNK1Q9BUB5 465 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 WDR91A4D1P6 747 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 CDK17Q00537 523 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 MAPK6Q16659 721 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 CYFIP1Q7L576 1253 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 VCPKMTQ9H867 229 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 ZWILCHQ9H900 591 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 RIC1Q4ADV7 1423 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 RASA4BC9J798 803 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 TLR3O15455 904 aaKnown RBP18.91■□□□□ 0.62
SNED1-204ENST00000401884 RASA4O43374 803 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 RTN2O75298 545 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 ZNF667Q5HYK9 610 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 KIAA1755Q5JYT7 1200 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 GJB7Q6PEY0 223 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 EXOC8Q8IYI6 725 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 PPP4R1Q8TF05 950 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 CCDC97Q96F63 343 aaPredicted RBP18.91■□□□□ 0.62
SNED1-204ENST00000401884 RBM41Q96IZ5 413 aaKnown RBP18.91■□□□□ 0.62
SNED1-204ENST00000401884 JCADQ9P266 1359 aa18.91■□□□□ 0.62
SNED1-204ENST00000401884 RSPH10B2B2RC85 870 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 MSH4O15457 936 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 RPSAP08865 295 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms