RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 ABCC2Q92887 1545 aa17.13■□□□□ 0.33
ITSN1-209ENST00000399352 UBTFL6P0CB48 400 aaPredicted RBP17.13■□□□□ 0.33
ITSN1-209ENST00000399352 KRT17Q04695 432 aa17.13■□□□□ 0.33
ITSN1-209ENST00000399352 ANKRD7Q92527 254 aa17.13■□□□□ 0.33
ITSN1-209ENST00000399352 SERPINB13Q9UIV8 391 aa17.13■□□□□ 0.33
ITSN1-209ENST00000399352 PNMA2Q9UL42 364 aa17.13■□□□□ 0.33
ITSN1-209ENST00000399352 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
ITSN1-209ENST00000399352 KRT8P05787 483 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 GFAPP14136 432 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 TMED10P49755 219 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 SEC24CP53992 1094 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 ANKMY2Q8IV38 441 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 DNAJC9Q8WXX5 260 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 CARSP49589 748 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 BTKQ06187 659 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 COASYQ13057 564 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 SYDE2Q5VT97 1194 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 RNF135Q8IUD6 432 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 THNSL1Q8IYQ7 743 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 DEAF1O75398 565 aaPredicted RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 TYK2P29597 1187 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 MECOMQ03112 1051 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 IMPG1Q17R60 797 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 OR6B3Q8NGW1 331 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 RNF139Q8WU17 664 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 ATXN7L3BQ96GX2 97 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 RNPC3Q96LT9 517 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 VIPAS39Q9H9C1 493 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 RPF1Q9H9Y2 349 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 SUGT1Q9Y2Z0 365 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 TMEM247A6NEH6 219 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 SMARCA1P28370 1054 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 EEPD1Q7L9B9 569 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 GFM2Q969S9 779 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 ERP27Q96DN0 273 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 PAWRQ96IZ0 340 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 TRIM51Q9BSJ1 452 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 DBR1Q9UK59 544 aaKnown RBP17.12■□□□□ 0.33
ITSN1-209ENST00000399352 HPCAL4Q9UM19 191 aa17.12■□□□□ 0.33
ITSN1-209ENST00000399352 IL10P22301 178 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 LSP1P33241 339 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ATXN3P54252 364 aaPredicted RBP17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ALCAMQ13740 583 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 CHP1Q99653 195 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 FSD1LQ9BXM9 530 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 DLGAP2Q9P1A6 1054 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 LONRF1Q17RB8 773 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 TAGAPQ8N103 731 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 TBC1D23Q9NUY8 699 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ZNF518AQ6AHZ1 1483 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 PP2D1A8MPX8 630 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 H0Y626 953 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ZSCAN9O15535 394 aaPredicted RBP17.11■□□□□ 0.33
ITSN1-209ENST00000399352 TRIM16O95361 564 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 AGTP01019 485 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ZNF667Q5HYK9 610 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 CD248Q9HCU0 757 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 RHBDL2Q9NX52 303 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
ITSN1-209ENST00000399352 HNRNPH1P31943 449 aaKnown RBP17.11■□□□□ 0.33
ITSN1-209ENST00000399352 DHX34Q14147 1143 aaKnown RBP17.11■□□□□ 0.33
ITSN1-209ENST00000399352 DCAF15Q66K64 600 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 TBC1D10CQ8IV04 446 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 AGGF1Q8N302 714 aaeCLIP17.11■□□□□ 0.33
ITSN1-209ENST00000399352 CPVLQ9H3G5 476 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 SLC40A1Q9NP59 571 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ATP11BQ9Y2G3 1177 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 VCAM1P19320 739 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ARMCX2Q7L311 632 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ADCK1Q86TW2 530 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 TTC8Q8TAM2 541 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 RAD54LQ92698 747 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
ITSN1-209ENST00000399352 MARCOQ9UEW3 520 aaPredicted RBP17.11■□□□□ 0.33
ITSN1-209ENST00000399352 KDM5DQ9BY66 1539 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 PNMA6FA0A0J9YX94 578 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
ITSN1-209ENST00000399352 CCND1P24385 295 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 IFNA8P32881 189 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 SERPINB10P48595 397 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 PDXDC2PQ6P474 469 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 CCNI2Q6ZMN8 369 aaPredicted RBP17.1■□□□□ 0.33
ITSN1-209ENST00000399352 XXYLT1Q8NBI6 393 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 CATSPER1Q8NEC5 780 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 XPO6Q96QU8 1125 aaKnown RBP17.1■□□□□ 0.33
ITSN1-209ENST00000399352 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 CYP26B1Q9NR63 512 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 ASNSD1Q9NWL6 643 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 STK32BQ9NY57 414 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 SERPINI2O75830 405 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 IRAK1P51617 712 aa17.1■□□□□ 0.33
ITSN1-209ENST00000399352 LBRQ14739 615 aaKnown RBP17.1■□□□□ 0.33
ITSN1-209ENST00000399352 FASTKD1Q53R41 847 aaKnown RBP17.1■□□□□ 0.33
ITSN1-209ENST00000399352 SHC4Q6S5L8 630 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms