RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TRMT10CQ7L0Y3 403 aaKnown RBP21.02■□□□□ 0.96
SHANK1-203ENST00000391813 DCTN4Q9UJW0 460 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 NVLO15381 856 aaKnown RBP21.02■□□□□ 0.96
SHANK1-203ENST00000391813 SERPINB4P48594 390 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 TAF12Q16514 161 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 CCDC137Q6PK04 289 aaKnown RBP21.02■□□□□ 0.96
SHANK1-203ENST00000391813 MYCBPAPQ8TBZ2 947 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 RNPC3Q96LT9 517 aaKnown RBP21.02■□□□□ 0.96
SHANK1-203ENST00000391813 LCMT1Q9UIC8 334 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 TLK1Q9UKI8 766 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 ORC6Q9Y5N6 252 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 HNRNPDLO14979 420 aaKnown RBP21.02■□□□□ 0.95
SHANK1-203ENST00000391813 CDC27P30260 824 aa21.02■□□□□ 0.95
SHANK1-203ENST00000391813 TTC13Q8NBP0 860 aa21.02■□□□□ 0.95
SHANK1-203ENST00000391813 ZNF341Q9BYN7 854 aa21.02■□□□□ 0.95
SHANK1-203ENST00000391813 WNT8AQ9H1J5 351 aa21.02■□□□□ 0.95
SHANK1-203ENST00000391813 ZNF277Q9NRM2 450 aaPredicted RBP21.02■□□□□ 0.95
SHANK1-203ENST00000391813 SMG5Q9UPR3 1016 aaKnown RBP21.02■□□□□ 0.95
SHANK1-203ENST00000391813 ARHGAP23Q9P227 1491 aa21.02■□□□□ 0.95
SHANK1-203ENST00000391813 GYPCP04921 128 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 MCF2P10911 925 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 KRT10P13645 584 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 SLC18A3Q16572 532 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 KIAA1755Q5JYT7 1200 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 SESTD1Q86VW0 696 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 HIPK4Q8NE63 616 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 OXER1Q8TDS5 423 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 CDHR1Q96JP9 859 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 PIH1D3Q9NQM4 214 aaKnown RBP21.01■□□□□ 0.95
SHANK1-203ENST00000391813 DEPDC5O75140 1603 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 IQSEC2Q5JU85 1478 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 A6NJR5 290 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 CFLARO15519 480 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 CDH16O75309 829 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 PCYT1AP49585 367 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 CYB5R4Q7L1T6 521 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 RSRC2Q7L4I2 434 aaKnown RBP21.01■□□□□ 0.95
SHANK1-203ENST00000391813 PRMT1Q99873 361 aaKnown RBP21.01■□□□□ 0.95
SHANK1-203ENST00000391813 VCPKMTQ9H867 229 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 PITPNM2Q9BZ72 1349 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 TMEM131LA2VDJ0 1609 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 CFAP69A5D8W1 941 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 TMEM191BP0C7N4 346 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 C16orf87Q6PH81 154 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 RAPH1Q70E73 1250 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 CATSPER1Q8NEC5 780 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 CD248Q9HCU0 757 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 TTLL3Q9Y4R7 772 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 ADSSL1Q8N142 457 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 SNF8Q96H20 258 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 PIGSQ96S52 555 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 GINS2Q9Y248 185 aa21.01■□□□□ 0.95
SHANK1-203ENST00000391813 DARS2Q6PI48 645 aaKnown RBP21■□□□□ 0.95
SHANK1-203ENST00000391813 ZBTB8OSQ8IWT0 167 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 HDAC11Q96DB2 347 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 ISCUQ9H1K1 167 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 RBM12Q9NTZ6 932 aaKnown RBP21■□□□□ 0.95
SHANK1-203ENST00000391813 ZNRF3Q9ULT6 936 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 RFX1P22670 979 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 MED21Q13503 144 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 TMEM154Q6P9G4 183 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 MCAMP43121 646 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 RGS9BPQ6ZS82 235 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 ROPN1BQ9BZX4 212 aaPredicted RBP21■□□□□ 0.95
SHANK1-203ENST00000391813 ROPN1Q9HAT0 212 aaPredicted RBP21■□□□□ 0.95
SHANK1-203ENST00000391813 CCDC124Q96CT7 223 aaKnown RBP21■□□□□ 0.95
SHANK1-203ENST00000391813 TRIM15Q9C019 465 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 TRAF3IP3Q9Y228 551 aa21■□□□□ 0.95
SHANK1-203ENST00000391813 GDF11O95390 407 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 KCNA3P22001 575 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 TRIM59Q8IWR1 403 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
SHANK1-203ENST00000391813 PGM1P36871 562 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 STAT2P52630 851 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 RASSF3Q86WH2 238 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 CNOT8Q9UFF9 292 aaKnown RBP20.99■□□□□ 0.95
SHANK1-203ENST00000391813 ANAPC7Q9UJX3 599 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 ADGRB1O14514 1584 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 EIF4E1BA6NMX2 242 aaKnown RBP20.99■□□□□ 0.95
SHANK1-203ENST00000391813 H3BQF6 201 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 CARSP49589 748 aaKnown RBP20.99■□□□□ 0.95
SHANK1-203ENST00000391813 DPYDQ12882 1025 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 RARS2Q5T160 578 aaKnown RBP20.99■□□□□ 0.95
SHANK1-203ENST00000391813 STYK1Q6J9G0 422 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 STOX1Q6ZVD7 989 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 WWP1Q9H0M0 922 aa20.99■□□□□ 0.95
SHANK1-203ENST00000391813 TRAPPC11Q7Z392 1133 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 SAT1P21673 171 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 YARSP54577 528 aaKnown RBP20.98■□□□□ 0.95
SHANK1-203ENST00000391813 GPSM2P81274 684 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 SYDE1Q6ZW31 735 aaPredicted RBP20.98■□□□□ 0.95
SHANK1-203ENST00000391813 A0A1W2PQJ5 194 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 GPR101Q96P66 508 aaPredicted RBP20.98■□□□□ 0.95
SHANK1-203ENST00000391813 NRBP2Q9NSY0 501 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 ZNF211Q13398 564 aaPredicted RBP20.98■□□□□ 0.95
SHANK1-203ENST00000391813 RABL6Q3YEC7 729 aaPredicted RBP20.98■□□□□ 0.95
SHANK1-203ENST00000391813 TBC1D10BQ4KMP7 808 aaPredicted RBP20.98■□□□□ 0.95
SHANK1-203ENST00000391813 FAM160B1Q5W0V3 765 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 ANKRD27Q96NW4 1050 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms