RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MSRAQ9UJ68 235 aa4.93□□□□□ -1.62
TRAV40-201ENST00000390467 RCAN3Q9UKA8 241 aa4.93□□□□□ -1.62
TRAV40-201ENST00000390467 MYPNQ86TC9 1320 aa4.93□□□□□ -1.62
TRAV40-201ENST00000390467 KLRG2A4D1S0 409 aaPredicted RBP4.92□□□□□ -1.62
TRAV40-201ENST00000390467 GSG1L2A8MUP6 293 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 CYP27B1O15528 508 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 SUV39H1O43463 412 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 JUNP05412 331 aaKnown RBP4.92□□□□□ -1.62
TRAV40-201ENST00000390467 PFKMP08237 780 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 KPNA1P52294 538 aaPredicted RBP4.92□□□□□ -1.62
TRAV40-201ENST00000390467 FAM214AQ32MH5 1076 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 FKBP15Q5T1M5 1219 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 KIAA0907Q7Z7F0 614 aaPredicted RBP4.92□□□□□ -1.62
TRAV40-201ENST00000390467 ELOA2Q8IYF1 753 aaPredicted RBP4.92□□□□□ -1.62
TRAV40-201ENST00000390467 MB21D1Q8N884 522 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 MFSD3Q96ES6 412 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 OSBPL6Q9BZF3 934 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 MMRN2Q9H8L6 949 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 ING3Q9NXR8 418 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 PCDHB6Q9Y5E3 794 aa4.92□□□□□ -1.62
TRAV40-201ENST00000390467 DAPK3O43293 454 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 MTSS1O43312 755 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 SEC24DO94855 1032 aaPredicted RBP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 LSSP48449 732 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 MAN2A2P49641 1150 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 PHC1P78364 1004 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 CD69Q07108 199 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 TOB2Q14106 344 aaPredicted RBP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 SPIDRQ14159 915 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 TERF2Q15554 542 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 GPR158Q5T848 1215 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 ESPNLQ6ZVH7 1005 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 CXorf67Q86X51 503 aaPredicted RBP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 UNC5BQ8IZJ1 945 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 CMTM4Q8IZR5 234 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 PPM1KQ8N3J5 372 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 ZNF483Q8TF39 744 aaPredicted RBP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 LARP4BQ92615 738 aaKnown RBP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 FERMT2Q96AC1 680 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 PGBD4Q96DM1 585 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 HIST1H2AHQ96KK5 128 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 ZNF512Q96ME7 567 aaPredicted RBP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 HIST1H2AJQ99878 128 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 TRIM8Q9BZR9 551 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 PRDM12Q9H4Q4 367 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 SLC2A4RGQ9NR83 387 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 USP36Q9P275 1121 aaKnown RBP4.91□□□□□ -1.62
TRAV40-201ENST00000390467 PLAAQ9Y263 795 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 PPP2R3BQ9Y5P8 575 aa4.91□□□□□ -1.62
TRAV40-201ENST00000390467 A0A087X0B3 334 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 PRSS38A1L453 326 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 ALDH1A2O94788 518 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 MCM7P33993 719 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 IL2P60568 153 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 CNGB1Q14028 1251 aaPredicted RBP4.9□□□□□ -1.63
TRAV40-201ENST00000390467 HTR3DQ70Z44 454 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 LYSMD2Q8IV50 215 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 PASD1Q8IV76 773 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 CDYL2Q8N8U2 506 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 ZNF610Q8N9Z0 462 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 NEU4Q8WWR8 484 aaPredicted RBP4.9□□□□□ -1.63
TRAV40-201ENST00000390467 UIMC1Q96RL1 719 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 MENTQ9BUN1 341 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 GPR87Q9BY21 358 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 ENKD1Q9H0I2 346 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 PARPBPQ9NWS1 579 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 GPRC5BQ9NZH0 403 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 TMPRSS11EQ9UL52 423 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 SYNPO2Q9UMS6 1093 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 USP18Q9UMW8 372 aa4.9□□□□□ -1.63
TRAV40-201ENST00000390467 ST20-MTHFSA0A0A6YYL1 179 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 FAM20BO75063 409 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 FSBPO95073 299 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 FKBP9O95302 570 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 LY86O95711 162 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 MANFP55145 182 aaKnown RBP4.89□□□□□ -1.63
TRAV40-201ENST00000390467 NPEPPSP55786 919 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 MAN2A1Q16706 1144 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 CRB2Q5IJ48 1285 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 FKBP9P1Q75LS8 142 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 ZNF627Q7L945 461 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 MSL3Q8N5Y2 521 aaKnown RBP4.89□□□□□ -1.63
TRAV40-201ENST00000390467 AMER2Q8N7J2 671 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 MDGA1Q8NFP4 955 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 OR2W6PQ8NHA6 318 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 ATXN2LQ8WWM7 1075 aaKnown RBP4.89□□□□□ -1.63
TRAV40-201ENST00000390467 ARL8AQ96BM9 186 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 CLIP3Q96DZ5 547 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 KRTAP17-1Q9BYP8 105 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 EMC7Q9NPA0 242 aa4.89□□□□□ -1.63
TRAV40-201ENST00000390467 GRXCR1A8MXD5 290 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 ENPP3O14638 875 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 KDM1AO60341 852 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 PDE8AO60658 829 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 CLEC2LP0C7M8 214 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 LSP1P33241 339 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 SCNN1BP51168 640 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 PTTG1IPP53801 180 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 PPARAQ07869 468 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms