RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 NME8Q8N427 588 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 TAB3Q8N5C8 712 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 LRRC1Q9BTT6 524 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 WNT8AQ9H1J5 351 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ANAPC7Q9UJX3 599 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 TPX2Q9ULW0 747 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 FRMD3A2A2Y4 597 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 SLC26A4O43511 780 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 CHGBP05060 677 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 PRPSAP1Q14558 356 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 LLGL1Q15334 1064 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 BEND6Q5SZJ8 279 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 MIS18BP1Q6P0N0 1132 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 VGLL2Q8N8G2 317 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 PROCA1Q8NCQ7 364 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 SERPINI1Q99574 410 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 C7orf25Q9BPX7 421 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 FUCA2Q9BTY2 467 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 CALN1Q9BXU9 219 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ADAM22Q9P0K1 906 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 IPO11Q9UI26 975 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 PCDHA6Q9UN73 950 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 PCDHA8Q9Y5H6 950 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 CSADQ9Y600 493 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 E9PMD0 336 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 C21orf2O43822 256 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 TTC4O95801 387 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 GSTA1P08263 222 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 GSTA2P09210 222 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ESRRGP62508 458 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 UBXN2AP68543 259 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 GPSM2P81274 684 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 TRIP13Q15645 432 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 WDR75Q8IWA0 830 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 SH3RF3Q8TEJ3 882 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 EPN3Q9H201 632 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 SUDS3Q9H7L9 328 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 FAF1Q9UNN5 650 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 PDXKO00764 312 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 EIF3HO15372 352 aaKnown RBP eCLIP8.97□□□□□ -0.97
VPS36-201ENST00000378060 TLR3O15455 904 aaKnown RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 NCK2O43639 380 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 SRGAP2BP0DMP2 458 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 KRT3P12035 628 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 BRAFP15056 766 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 GUCY1A2P33402 732 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 ARL4AP40617 200 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 MDH1P40925 334 aaKnown RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 TFDP2Q14188 446 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 CTTNQ14247 550 aaKnown RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 DRAP1Q14919 205 aaPredicted RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 ZNF449Q6P9G9 518 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 BZW1Q7L1Q6 419 aaKnown RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 KCTD6Q8NC69 237 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 TMEM35BQ8NCS4 154 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 MCPH1Q8NEM0 835 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 LRGUKQ96M69 825 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 DRC3Q9H069 523 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 SPON1Q9HCB6 807 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 SAYSD1Q9NPB0 183 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 FBXL5Q9UKA1 691 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 KLRG2A4D1S0 409 aaPredicted RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 PLS3P13797 630 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 ECE1P42892 770 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 DEUP1Q05D60 604 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 PPP2R5CQ13362 524 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 RNF207Q6ZRF8 634 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 ENOSF1Q7L5Y1 443 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 EPM2AIP1Q7L775 607 aaPredicted RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 HAUS8Q9BT25 410 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 CCDC68Q9H2F9 335 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 SENP1Q9P0U3 644 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 KIF13BQ9NQT8 1826 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 A0A1W2PQJ5 194 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 PP2D1A8MPX8 630 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 K7ERI5 159 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 TTI1O43156 1089 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 PRPSAP2O60256 369 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 CTDNEP1O95476 244 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 PSAPP07602 524 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 JAK3P52333 1124 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 KLHL38Q2WGJ6 581 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 ERICH1Q86X53 443 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 CRLF3Q8IUI8 442 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 CNPY4Q8N129 248 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 SRBD1Q8N5C6 995 aaKnown RBP8.97□□□□□ -0.97
VPS36-201ENST00000378060 SDCCAG3Q96C92 435 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 LRRC37BQ96QE4 947 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 IL25Q9H293 177 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 TLK1Q9UKI8 766 aa8.97□□□□□ -0.97
VPS36-201ENST00000378060 GYG2O15488 501 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 PPFIA2O75334 1257 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 KRT38O76015 456 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 GDF11O95390 407 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 H2AFXP16104 143 aaPredicted RBP8.96□□□□□ -0.97
VPS36-201ENST00000378060 PRELPP51888 382 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 STX1BP61266 288 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms