RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 DLG4P78352 724 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 CDK17Q00537 523 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 CBWD6Q4V339 395 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 CBWD3Q5JTY5 395 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 CBWD5Q5RIA9 395 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 C1orf220Q5T0J3 134 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 GPIHBP1Q8IV16 184 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 XXYLT1Q8NBI6 393 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 KCNN1Q92952 543 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 EMID1Q96A84 441 aaPredicted RBP15.06■□□□□ 0
PTPRF-202ENST00000372405 ZIC5Q96T25 663 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 EXOC7Q9UPT5 735 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 USP20Q9Y2K6 914 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 EPN1Q9Y6I3 576 aaPredicted RBP15.06■□□□□ 0
PTPRF-202ENST00000372405 EVPLQ92817 2033 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 IGKV6-21A0A0C4DH24 114 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 GTPBP10A4D1E9 387 aaKnown RBP15.05■□□□□ 0
PTPRF-202ENST00000372405 DCAF8L1A6NGE4 600 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 TLR2O60603 784 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 NDUFA10O95299 355 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 ADRB2P07550 413 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 FMO5P49326 533 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 LAMC2Q13753 1193 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 PPP2R5AQ15172 486 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 EXOC3L4Q17RC7 722 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 TSR1Q2NL82 804 aaKnown RBP15.05■□□□□ 0
PTPRF-202ENST00000372405 TRAPPC12Q8WVT3 735 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 RNPEPQ9H4A4 650 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 SMARCAD1Q9H4L7 1026 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 PLCB1Q9NQ66 1216 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 ARHGAP20Q9P2F6 1191 aa15.05■□□□□ 0
PTPRF-202ENST00000372405 GOLGA8IPA6NC78 632 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 GOLGA8JA6NMD2 632 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 ABL1P00519 1130 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 GH1P01241 217 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 EDN1P05305 212 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 SMPD1P17405 629 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 NAMPTP43490 491 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 MCCD1P59942 119 aaPredicted RBP15.05■□□□□ -0
PTPRF-202ENST00000372405 CAPSQ13938 189 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 KLHDC7AQ5VTJ3 777 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 CBWD2Q8IUF1 395 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 PPTC7Q8NI37 304 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 AFG1LQ8WV93 481 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 ZBTB10Q96DT7 871 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 SAAL1Q96ER3 474 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 NHEJ1Q9H9Q4 299 aaPredicted RBP15.05■□□□□ -0
PTPRF-202ENST00000372405 FLRT1Q9NZU1 646 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 GCNT4Q9P109 453 aa15.05■□□□□ -0
PTPRF-202ENST00000372405 AJAP1Q9UKB5 411 aaPredicted RBP15.05■□□□□ -0
PTPRF-202ENST00000372405 KIF3CO14782 793 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 MAPK13O15264 365 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 LGALS2P05162 132 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 SLC26A2P50443 739 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 ACVR2BQ13705 512 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 BRDTQ58F21 947 aaPredicted RBP15.04■□□□□ -0
PTPRF-202ENST00000372405 HGSNATQ68CP4 663 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 SYT10Q6XYQ8 523 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 GBP6Q6ZN66 633 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 CACNA2D4Q7Z3S7 1137 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 ZNF592Q92610 1267 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 USP6NLQ92738 828 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 ABHD16BQ9H3Z7 469 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 ZNHIT6Q9NWK9 470 aaKnown RBP15.04■□□□□ -0
PTPRF-202ENST00000372405 PPME1Q9Y570 386 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 LRRIQ4A6NIV6 560 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 HNRNPDLO14979 420 aaKnown RBP15.04■□□□□ -0
PTPRF-202ENST00000372405 UCHL3P15374 230 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 ETF1P62495 437 aaKnown RBP15.04■□□□□ -0
PTPRF-202ENST00000372405 MAP2K5Q13163 448 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 DUSP28Q4G0W2 176 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 INTS8Q75QN2 995 aaKnown RBP15.04■□□□□ -0
PTPRF-202ENST00000372405 LRRC71Q8N4P6 559 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 PRPF31Q8WWY3 499 aaKnown RBP15.04■□□□□ -0
PTPRF-202ENST00000372405 FBXL18Q96ME1 805 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 IRX2Q9BZI1 471 aaPredicted RBP15.04■□□□□ -0
PTPRF-202ENST00000372405 LZTFL1Q9NQ48 299 aa15.04■□□□□ -0
PTPRF-202ENST00000372405 ZSWIM8A7E2V4 1837 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 GOLGA6L9A6NEM1 432 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 H0YCG3 227 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 KIF2AO00139 706 aaPredicted RBP15.03■□□□□ -0
PTPRF-202ENST00000372405 ZNF263O14978 683 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 ARHGAP25P42331 645 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 VAMP7P51809 220 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 INHBEP58166 350 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 PPP3CAQ08209 521 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 CRHR2Q13324 411 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 SNRNP35Q16560 246 aaKnown RBP15.03■□□□□ -0
PTPRF-202ENST00000372405 C16orf70Q9BSU1 422 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 HAPLN2Q9GZV7 340 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 ERAP1Q9NZ08 941 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 ZHX1Q9UKY1 873 aaPredicted RBP15.03■□□□□ -0
PTPRF-202ENST00000372405 TRPC6Q9Y210 931 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 MGAMO43451 1857 aa15.03■□□□□ -0
PTPRF-202ENST00000372405 HBP1O60381 514 aa15.02■□□□□ -0
PTPRF-202ENST00000372405 HOXC6P09630 235 aa15.02■□□□□ -0
PTPRF-202ENST00000372405 ZNF286BP0CG31 522 aa15.02■□□□□ -0
PTPRF-202ENST00000372405 CTGFP29279 349 aa15.02■□□□□ -0
PTPRF-202ENST00000372405 PRAMEF19Q5SWL8 479 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms