RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CGNQ9P2M7 1197 aaKnown RBP13.24□□□□□ -0.29
USF1-203ENST00000368021 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 A0A1W2PQC6 194 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 H0YCG3 227 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 ADCY6O43306 1168 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 PGK1P00558 417 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 NPTX2P47972 431 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 DNM2P50570 870 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 PLCB4Q15147 1175 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 HAUS6Q7Z4H7 955 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 TRIM50Q86XT4 487 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 TMEM161BQ8NDZ6 487 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 IFT74Q96LB3 600 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 HBP1O60381 514 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 NR3C1P04150 777 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 LGALS2P05162 132 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 RARBP10826 455 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 AKR1A1P14550 325 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 TNFAIP2Q03169 654 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 TBX2Q13207 712 aaPredicted RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 MAN2A1Q16706 1144 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 MIIPQ5JXC2 388 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 GJC2Q5T442 439 aaPredicted RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 SLC9A9Q8IVB4 645 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 AFG1LQ8WV93 481 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 PAWRQ96IZ0 340 aaKnown RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 ACCSQ96QU6 501 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 JPH2Q9BR39 696 aaPredicted RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 NOC4LQ9BVI4 516 aaKnown RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 POLR3FQ9H1D9 316 aaPredicted RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 OGDHLQ9ULD0 1010 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 FAM184BQ9ULE4 1060 aa13.23□□□□□ -0.29
USF1-203ENST00000368021 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
USF1-203ENST00000368021 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
USF1-203ENST00000368021 ZBTB42B2RXF5 422 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
USF1-203ENST00000368021 MSCO60682 206 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 ARL2P36404 184 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
USF1-203ENST00000368021 UBXN1Q04323 297 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 TBC1D8BQ0IIM8 1120 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 PPP2R5AQ15172 486 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 LRRC8AQ8IWT6 810 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 KCNF1Q9H3M0 494 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 XPNPEP3Q9NQH7 507 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 KMT5AQ9NQR1 393 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 AGPAT3Q9NRZ7 376 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 ARHGAP28Q9P2N2 729 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 EXOC7Q9UPT5 735 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 Q9Y3F1 56 aa13.22□□□□□ -0.29
USF1-203ENST00000368021 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
USF1-203ENST00000368021 LAMA2P24043 3122 aaKnown RBP13.21□□□□□ -0.29
USF1-203ENST00000368021 IGKV6-21A0A0C4DH24 114 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 CCDC169A6NNP5 214 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 SLC16A4O15374 487 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 MMP3P08254 477 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.29
USF1-203ENST00000368021 MARK3P27448 753 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 NAMPTP43490 491 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 DGKDQ16760 1214 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 CCDC40Q4G0X9 1142 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 VWA3BQ502W6 1294 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 MAP4K3Q8IVH8 894 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 SYCP3Q8IZU3 236 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 C16orf70Q9BSU1 422 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 MKNK1Q9BUB5 465 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 METTL14Q9HCE5 456 aaKnown RBP13.21□□□□□ -0.29
USF1-203ENST00000368021 DMAC2Q9NW81 257 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
USF1-203ENST00000368021 TBX20Q9UMR3 447 aa13.21□□□□□ -0.29
USF1-203ENST00000368021 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.298e-7■■■□□ 17.7
USF1-203ENST00000368021 A6NJR5 290 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 MLLT1Q03111 559 aaPredicted RBP13.2□□□□□ -0.3
USF1-203ENST00000368021 PPP2R3AQ06190 1150 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 TRIM14Q14142 442 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 ZNF484Q5JVG2 852 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 FKBP15Q5T1M5 1219 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 IER5Q5VY09 327 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 KSR1Q8IVT5 923 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 TRIM59Q8IWR1 403 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
USF1-203ENST00000368021 TCP11Q8WWU5 503 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 ERGIC2Q96RQ1 377 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 NDST4Q9H3R1 872 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
USF1-203ENST00000368021 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
USF1-203ENST00000368021 GLRA2P23416 452 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 RGS19P49795 217 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms