RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PPP2R2AP63151 447 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 MAP4K2Q12851 820 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 SSPNQ14714 243 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 TWISTNBQ3B726 338 aaPredicted RBP6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 MBLAC2Q68D91 279 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 IGDCC3Q8IVU1 814 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 PPIL6Q8IXY8 311 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 KCTD13Q8WZ19 329 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 ZNF669Q96BR6 464 aaPredicted RBP6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 CHMP4AQ9BY43 222 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 AP5M1Q9H0R1 490 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 MARCH2Q9P0N8 246 aa6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 TNRC18O15417 2968 aaPredicted RBP6.56□□□□□ -1.36
RNU4-4P-201ENST00000364588 ZC3H12DA2A288 527 aaKnown RBP6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 SNAP23O00161 211 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 LTBRP36941 435 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 FKBP1BP68106 108 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 PRR5P85299 388 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 CYP4F3Q08477 520 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 PRKG1Q13976 671 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 GCKRQ14397 625 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 HSP90AA2PQ14568 343 aaPredicted RBP6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 TTLL5Q6EMB2 1281 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 CTU1Q7Z7A3 348 aaKnown RBP6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 LRRC47Q8N1G4 583 aaKnown RBP6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 Q8N1Y9 231 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 ALG3Q92685 438 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 MPHOSPH8Q99549 860 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 COA1Q9GZY4 146 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 IRF2BPLQ9H1B7 796 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 FAN1Q9Y2M0 1017 aa6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 TIMM13Q9Y5L4 95 aaPredicted RBP6.55□□□□□ -1.36
RNU4-4P-201ENST00000364588 A0A1B0GUL6 1792 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 ZNF804BA4D1E1 1349 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 MYO3BQ8WXR4 1341 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 IRS2Q9Y4H2 1338 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 BUB1BO60566 1050 aaPredicted RBP6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 FUCA1P04066 466 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 NF2P35240 595 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 KCNJ4P48050 445 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 CHRNDQ07001 517 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 SF3A1Q15459 793 aaKnown RBP6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 MROH9Q5TGP6 573 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 CNKSR3Q6P9H4 555 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 LCNL1Q6ZST4 164 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 RIOX2Q8IUF8 465 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 TMEM145Q8NBT3 493 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 DNAAF4Q8WXU2 420 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 AARSD1Q9BTE6 412 aaKnown RBP6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 FBLN5Q9UBX5 448 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 HDAC9Q9UKV0 1011 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 FZD1Q9UP38 647 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 CACNA1FO60840 1977 aa6.54□□□□□ -1.36
RNU4-4P-201ENST00000364588 FANCIQ9NVI1 1328 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 ECM29Q5VYK3 1845 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 A0A1W2PQU0 124 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 TAF5LO75529 589 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 CSF1RP07333 972 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 NCAM1P13591 858 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 IGFBP6P24592 240 aaPredicted RBP6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 SLC6A11P48066 632 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 INF2Q27J81 1249 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 ARMC9Q7Z3E5 817 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 FAM129CQ86XR2 697 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 APOBEC3FQ8IUX4 373 aaKnown RBP6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 CCDC103Q8IW40 242 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 TEX2Q8IWB9 1127 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 KREMEN2Q8NCW0 462 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 LINS1Q8NG48 757 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 C1orf159Q96HA4 380 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 IER2Q9BTL4 223 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 PLA2G12BQ9BX93 195 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 ANKRD2Q9GZV1 360 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 MYH16Q9H6N6 1097 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 CD209Q9NNX6 404 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 JAG2Q9Y219 1238 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 COA3Q9Y2R0 106 aaPredicted RBP6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 MSRB2Q9Y3D2 182 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 PCDHAC2Q9Y5I4 1007 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 HCFC2Q9Y5Z7 792 aa6.53□□□□□ -1.36
RNU4-4P-201ENST00000364588 CLRN2A0PK11 232 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 ANKRD18BA2A2Z9 1011 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 C22orf46C9J442 243 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 PLIN1O60240 522 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 NTRK1P04629 796 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 TM4SF4P48230 202 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 FOXO4P98177 505 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 IFIT5Q13325 482 aaKnown RBP6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 DLGAP5Q15398 846 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 PRSS53Q2L4Q9 553 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 SLC35F1Q5T1Q4 408 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 CERS5Q8N5B7 392 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 PLEKHO2Q8TD55 490 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 SEC14L1Q92503 715 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 DPF3Q92784 378 aa6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 DACT3Q96B18 629 aaPredicted RBP6.52□□□□□ -1.37
RNU4-4P-201ENST00000364588 TMEM169Q96HH4 297 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms