RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 M0QYV0 167 aa12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 PSMC1P62191 440 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 CAV1Q03135 178 aa12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 STOX1Q6ZVD7 989 aa12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 ZNF280CQ8ND82 737 aa12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 MORC4Q8TE76 937 aa12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 TRIM62Q9BVG3 475 aa12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 NOVA2Q9UNW9 492 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-201ENST00000314845 A0A1W2PQC6 194 aa12.77□□□□□ -0.36
AMBRA1-201ENST00000314845 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.36
AMBRA1-201ENST00000314845 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.36
AMBRA1-201ENST00000314845 SAAL1Q96ER3 474 aa12.77□□□□□ -0.36
AMBRA1-201ENST00000314845 SETBP1Q9Y6X0 1596 aa12.77□□□□□ -0.36
AMBRA1-201ENST00000314845 MYBL1P10243 752 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 GANCQ8TET4 914 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 EFHD1Q9BUP0 239 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 PFASO15067 1338 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 KRT38O76015 456 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 ATG16L1Q676U5 607 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 SHC4Q6S5L8 630 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 MAGEB5Q9BZ81 275 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 SLC26A4O43511 780 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 NTSR2O95665 410 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 IFT88Q13099 833 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 RNF149Q8NC42 400 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 ZNF70Q9UC06 446 aaPredicted RBP12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 IP6K2Q9UHH9 426 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 KCNH4Q9UQ05 1017 aa12.77□□□□□ -0.37
AMBRA1-201ENST00000314845 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 A8MXQ7 604 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 YWHABP31946 246 aaKnown RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 TAF1CQ15572 869 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 GTF3C2Q8WUA4 911 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 TNIP3Q96KP6 325 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 GBP5Q96PP8 586 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 CNTNAP4Q9C0A0 1308 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 ACSL3O95573 720 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 NR1D1P20393 614 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 LIG3P49916 1009 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 SLC7A5Q01650 507 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 CASP8Q14790 479 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 TTC19Q6DKK2 380 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 LINC00116Q8NCU8 138 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 SCG3Q8WXD2 468 aaKnown RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 SEPT1Q8WYJ6 367 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 KIF12Q96FN5 646 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 TRIM9Q9C026 710 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 SAYSD1Q9NPB0 183 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 SNX24Q9Y343 169 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 HEY1Q9Y5J3 304 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 EMSYQ7Z589 1322 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 FTLP02792 175 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 TAC1P20366 129 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 NNMTP40261 264 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 CASP2P42575 452 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 FBXO33Q7Z6M2 555 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 HEMGNQ9BXL5 484 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 DPYSL4O14531 572 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 GGPS1O95749 300 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 STYK1Q6J9G0 422 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 C16orf86Q6ZW13 317 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 FSD1LQ9BXM9 530 aa12.76□□□□□ -0.37
AMBRA1-201ENST00000314845 PDS5AQ29RF7 1337 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 TTC26A0AVF1 554 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 TRIM49P0CI25 452 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 TRIM49CP0CI26 452 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 PLS3P13797 630 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 EFHC2Q5JST6 749 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 KIAA1755Q5JYT7 1200 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 TRIM67Q6ZTA4 783 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 NUP85Q9BW27 656 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 ZBBXA8MT70 800 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 NVLO15381 856 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 RFC1P35251 1148 aaPredicted RBP12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 TAP1Q03518 808 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 SNAPC2Q13487 334 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 MXD4Q14582 209 aaPredicted RBP12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 RHOT1Q8IXI2 618 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 KLHL29Q96CT2 875 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 PHF20Q9BVI0 1012 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 SMARCAD1Q9H4L7 1026 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
AMBRA1-201ENST00000314845 PRKCBP05771 671 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms