RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MTMR9Q96QG7 549 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 SCOCQ9UIL1 159 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 KLRF2D3W0D1 207 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 HGSO14964 777 aaPredicted RBP14.14□□□□□ -0.15
NUP54-201ENST00000264883 UNC5CO95185 931 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 GSTO1P78417 241 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 SLC29A2Q14542 456 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 LRRC14Q15048 493 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 ENOX2Q16206 610 aaKnown RBP14.14□□□□□ -0.15
NUP54-201ENST00000264883 PARP6Q2NL67 630 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 FAM83BQ5T0W9 1011 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 MYOCDQ8IZQ8 938 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 IFT43Q96FT9 208 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 ZSCAN9O15535 394 aaPredicted RBP14.14□□□□□ -0.15
NUP54-201ENST00000264883 ZBTB48P10074 688 aaPredicted RBP14.14□□□□□ -0.15
NUP54-201ENST00000264883 PTDSS1P48651 473 aaKnown RBP14.14□□□□□ -0.15
NUP54-201ENST00000264883 CALCRLQ16602 461 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 MUM1Q2TAK8 710 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 KRT79Q5XKE5 535 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 DZIP1Q86YF9 867 aaKnown RBP14.14□□□□□ -0.15
NUP54-201ENST00000264883 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
NUP54-201ENST00000264883 RASGEF1CQ8N431 466 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 MGARPQ8TDB4 240 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 TBCKQ8TEA7 893 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 RMDN2Q96LZ7 410 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 PLEKHG4BQ96PX9 1271 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 TMEM47Q9BQJ4 181 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 TXLNGQ9NUQ3 528 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 AIPL1Q9NZN9 384 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 PRKAG3Q9UGI9 489 aa14.14□□□□□ -0.15
NUP54-201ENST00000264883 QSER1Q2KHR3 1735 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 GSTA2P09210 222 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 FAM163BP0C2L3 166 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 KLRK1P26718 216 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 POLR2FP61218 127 aaKnown RBP14.13□□□□□ -0.15
NUP54-201ENST00000264883 KLHL30Q0D2K2 578 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 SLC35G1Q2M3R5 365 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 TMEM119Q4V9L6 283 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 DAAM2Q86T65 1068 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 ENDOVQ8N8Q3 282 aaKnown RBP14.13□□□□□ -0.15
NUP54-201ENST00000264883 LRRC57Q8N9N7 239 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 PHC3Q8NDX5 983 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 EPS8L3Q8TE67 593 aaKnown RBP14.13□□□□□ -0.15
NUP54-201ENST00000264883 PNMA5Q96PV4 448 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 DDX23Q9BUQ8 820 aaKnown RBP14.13□□□□□ -0.15
NUP54-201ENST00000264883 ZDHHC18Q9NUE0 388 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 CTTNBP2NLQ9P2B4 639 aa14.13□□□□□ -0.15
NUP54-201ENST00000264883 BZW2Q9Y6E2 419 aaKnown RBP14.13□□□□□ -0.15
NUP54-201ENST00000264883 NOL4O94818 638 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 USP17L8P0C7I0 530 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 SLCO1A2P46721 670 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 POU5F1Q01860 360 aaKnown RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 RAPGEF1Q13905 1077 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 ZCWPW2Q504Y3 356 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 FOXB2Q5VYV0 432 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 RBBP8NLQ8NC74 664 aaPredicted RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 UCMAQ8WVF2 138 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 RPGRQ92834 1020 aaKnown RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 FAM136AQ96C01 138 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 KLHL14Q9P2G3 628 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 CNOT7Q9UIV1 285 aaKnown RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 NAV1Q8NEY1 1877 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 EVX2Q03828 476 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 RNASELQ05823 741 aaKnown RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 PEX26Q7Z412 305 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 DEFB132Q7Z7B7 95 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 SLC51AQ86UW1 340 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 AGGF1Q8N302 714 aaeCLIP14.12□□□□□ -0.15
NUP54-201ENST00000264883 LSM14BQ9BX40 385 aaKnown RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 ZWILCHQ9H900 591 aa14.12□□□□□ -0.15
NUP54-201ENST00000264883 DMAP1Q9NPF5 467 aaPredicted RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 DBR1Q9UK59 544 aaKnown RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
NUP54-201ENST00000264883 H0Y3Z8 333 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 PRDX5P30044 214 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 TXKP42681 527 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 PSMC4P43686 418 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 PLTPP55058 493 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 LMNB2Q03252 620 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 KLRC3Q07444 240 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 ASIC2Q16515 512 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 RNF43Q68DV7 783 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 BTNL9Q6UXG8 535 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 UHMK1Q8TAS1 419 aaKnown RBP14.11□□□□□ -0.15
NUP54-201ENST00000264883 LRMDAQ9H2I8 198 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 STK32BQ9NY57 414 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 KIF13BQ9NQT8 1826 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 LRRC37AA6NMS7 1700 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 SMAPO00193 183 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 RASGRF2O14827 1237 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 GM2AP17900 193 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 PPP4CP60510 307 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 DR1Q01658 176 aa14.11□□□□□ -0.15
NUP54-201ENST00000264883 CCDC15Q0P6D6 951 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms