RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ANKRD6Q9Y2G4 727 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 GIT1Q9Y2X7 761 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 CTDP1Q9Y5B0 961 aaPredicted RBP5.92□□□□□ -1.46
CCDC54-201ENST00000261058 NUAK1O60285 661 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 MARCH6O60337 910 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 NDUFS2O75306 463 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 LY86O95711 162 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 CCND1P24385 295 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 SLURP1P55000 103 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 ADKP55263 362 aaKnown RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 SESN2P58004 480 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 MEF2AQ02078 507 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 MALLQ13021 153 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 CLUL1Q15846 466 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 ZNF124Q15973 351 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 MAN2A1Q16706 1144 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 MCTP2Q6DN12 878 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 KLHDC10Q6PID8 442 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 BTNL9Q6UXG8 535 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 CLEC14AQ86T13 490 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 TCEAL8Q8IYN2 117 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 UNC5BQ8IZJ1 945 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 JPH3Q8WXH2 748 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 FATE1Q969F0 183 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 ACE2Q9BYF1 805 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 IP6K2Q9UHH9 426 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 PNMA8BQ9ULN7 279 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 ADAMTS20P59510 1910 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 FSBPO95073 299 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 ZNF888P0CJ79 500 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 GAAP10253 952 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 NRG3P56975 720 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 CDK17Q00537 523 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 CD69Q07108 199 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 USP10Q14694 798 aaKnown RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 PCOLCEQ15113 449 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 FAM102BQ5T8I3 360 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 FMNL3Q8IVF7 1028 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 GLB1L3Q8NCI6 653 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 LPPQ93052 612 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 TSR2Q969E8 191 aaKnown RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 GFM2Q969S9 779 aaKnown RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 LCORQ96JN0 433 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 SLC2A13Q96QE2 648 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 BARX1Q9HBU1 254 aaPredicted RBP5.91□□□□□ -1.46
CCDC54-201ENST00000261058 DNAI1Q9UI46 699 aa5.91□□□□□ -1.46
CCDC54-201ENST00000261058 NOBOXO60393 691 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 CYP1A1P04798 512 aaPredicted RBP5.9□□□□□ -1.47
CCDC54-201ENST00000261058 HNRNPLP14866 589 aaKnown RBP eCLIP5.9□□□□□ -1.47
CCDC54-201ENST00000261058 XPAP23025 273 aaPredicted RBP5.9□□□□□ -1.47
CCDC54-201ENST00000261058 MCAMP43121 646 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 MRE11P49959 708 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 PPP3CAQ08209 521 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 NFYCQ13952 458 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 ACAP2Q15057 778 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 AGBL4Q5VU57 503 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 CIAPIN1Q6FI81 312 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 CHPFQ8IZ52 775 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 PIK3C3Q8NEB9 887 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 HOXB13Q92826 284 aaPredicted RBP5.9□□□□□ -1.47
CCDC54-201ENST00000261058 HSPBAP1Q96EW2 488 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 AIFM3Q96NN9 605 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 GREM2Q9H772 168 aa5.9□□□□□ -1.47
CCDC54-201ENST00000261058 C2orf78A6NCI8 922 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 MROH6A6NGR9 719 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 PF4V1P10720 104 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 VCAM1P19320 739 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 CFPP27918 469 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 HGFACQ04756 655 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 MGAT5Q09328 741 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 VMACQ2NL98 169 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 CXorf57Q6NSI4 855 aaKnown RBP5.89□□□□□ -1.47
CCDC54-201ENST00000261058 LMBR1LQ6UX01 489 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 COA7Q96BR5 231 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 OR10A2Q9H208 303 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 SERPINB13Q9UIV8 391 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 PTPN22Q9Y2R2 807 aa5.89□□□□□ -1.47
CCDC54-201ENST00000261058 MTSS1O43312 755 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 LTA4HP09960 611 aaKnown RBP5.88□□□□□ -1.47
CCDC54-201ENST00000261058 AKAP5P24588 427 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 CTSSP25774 331 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 ADAM8P78325 824 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 MGAT2Q10469 447 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 ADAM15Q13444 863 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 TBR1Q16650 682 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 C19orf54Q5BKX5 351 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 ZMAT1Q5H9K5 638 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 MUM1L1Q5H9M0 696 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 RRP12Q5JTH9 1297 aaKnown RBP5.88□□□□□ -1.47
CCDC54-201ENST00000261058 GJC2Q5T442 439 aaPredicted RBP5.88□□□□□ -1.47
CCDC54-201ENST00000261058 TAS1R1Q7RTX1 841 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 RTKN2Q8IZC4 609 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 THEMISQ8N1K5 641 aaPredicted RBP5.88□□□□□ -1.47
CCDC54-201ENST00000261058 MAGEB6Q8N7X4 407 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 RELTQ969Z4 430 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 C8orf48Q96LL4 319 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 TOX2Q96NM4 488 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 IPPQ9Y573 584 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms