RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GOLGA6L10A6NI86 522 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 VGLL3A8MV65 326 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 TMEM253P0C7T8 217 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 ZYXQ15942 572 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 PHLDB3Q6NSJ2 640 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 C1orf131Q8NDD1 294 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 LRRC45Q96CN5 670 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 SLITRK6Q9H5Y7 841 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 ARHGEF10LQ9HCE6 1279 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 EXOC3O60645 756 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 MYZAPP0CAP1 466 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 PPATQ06203 517 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 ZNF844Q08AG5 666 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 PRPF4BQ13523 1007 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 TTC31Q49AM3 519 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 CC2D2BQ6DHV5 1058 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 MAEAQ7L5Y9 396 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 ADAT2Q7Z6V5 191 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 UBLCP1Q8WVY7 318 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 HOOK2Q96ED9 719 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 FAM107BQ9H098 131 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 THAP2Q9H0W7 228 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 DPH5Q9H2P9 285 aa21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-225ENST00000600733 A0A087WUV0 522 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 DDX39AO00148 427 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 DDX3YO15523 660 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 PPP1R37O75864 691 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 MDH1P40925 334 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 BFSP1Q12934 665 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 LRIG3Q6UXM1 1119 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 STXBP4Q6ZWJ1 553 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 SYCP3Q8IZU3 236 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 DAW1Q8N136 415 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 EPN3Q9H201 632 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 ODF2LQ9ULJ1 636 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 TMX2Q9Y320 296 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 UBE4BO95155 1302 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 BRWD3Q6RI45 1802 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 TISP43B9A030 160 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 HIP1RO75146 1068 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 VIL1P09327 827 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 COPB2P35606 906 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 LIG3P49916 1009 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 SEC24CP53992 1094 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 PPP2R5AQ15172 486 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 MICALL1Q8N3F8 863 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 CCDC26Q8TAB7 109 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 TRIM51Q9BSJ1 452 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 TRIM31Q9BZY9 425 aa21.94■■□□□ 1.1
SHKBP1-225ENST00000600733 CLRN2A0PK11 232 aa21.93■■□□□ 1.1
SHKBP1-225ENST00000600733 FOXN3O00409 490 aaPredicted RBP21.93■■□□□ 1.1
SHKBP1-225ENST00000600733 DLG4P78352 724 aa21.93■■□□□ 1.1
SHKBP1-225ENST00000600733 MAPK7Q13164 816 aa21.93■■□□□ 1.1
SHKBP1-225ENST00000600733 AKT1S1Q96B36 256 aa21.93■■□□□ 1.1
SHKBP1-225ENST00000600733 PKD2L1Q9P0L9 805 aa21.93■■□□□ 1.1
SHKBP1-225ENST00000600733 COG5Q9UP83 839 aa21.93■■□□□ 1.1
SHKBP1-225ENST00000600733 ARHGEF35A5YM69 484 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 MYO1FO00160 1098 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 IPO5O00410 1097 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 TNFAIP3P21580 790 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 POU5F1Q01860 360 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 ZNF211Q13398 564 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 PTGISQ16647 500 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 WDR11Q9BZH6 1224 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 RANBP17Q9H2T7 1088 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 GOPCQ9HD26 462 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 CHRNA5P30532 468 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 TMC3Q7Z5M5 1100 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 LMO3Q8TAP4 145 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 SLC20A1Q8WUM9 679 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 SEC14L1Q92503 715 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 PCIF1Q9H4Z3 704 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 FBXO28Q9NVF7 368 aa21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 HERC5Q9UII4 1024 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 UTP11Q9Y3A2 253 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-225ENST00000600733 TRAF1Q13077 416 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 STRA6Q9BX79 667 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 TEKT3Q9BXF9 490 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 KCND2Q9NZV8 630 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 BCCIPQ9P287 314 aaKnown RBP eCLIP21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 TTC7AQ9ULT0 858 aaPredicted RBP21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 SYNPO2Q9UMS6 1093 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 YDJCA8MPS7 323 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 H0YIN7 160 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 K7ENM7 598 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 GUCY2CP25092 1073 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 B3GNT9Q6UX72 402 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 ERVK-5Q9HDB9 667 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 ZBTB21Q9ULJ3 1066 aa21.91■■□□□ 1.1
SHKBP1-225ENST00000600733 CCDC172P0C7W6 258 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 DHX9Q08211 1270 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 KIF22Q14807 665 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 ALG3Q92685 438 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 LRRC4CQ9HCJ2 640 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 MRPL11Q9Y3B7 192 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 EMSYQ7Z589 1322 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 ANKRD62A6NC57 917 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 CPP00450 1065 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 MUTP22033 750 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms