RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GALK1P51570 392 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PDAP1Q13442 181 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 DIS3LQ8TF46 1054 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 OSBP2Q969R2 916 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 ISCUQ9H1K1 167 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GRID2IPA4D2P6 1211 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GOLGA8JA6NMD2 632 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GOLGA8TH3BQL2 631 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 R3HDM1Q15032 1099 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 KRT27Q7Z3Y8 459 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 STK32AQ8WU08 396 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF75CPQ92670 426 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 SDCCAG3Q96C92 435 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 LACRTQ9GZZ8 138 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GALNT8Q9NY28 637 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 NR5A1Q13285 461 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC85BQ15834 202 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PPP1R15BQ5SWA1 713 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 METTL13Q8N6R0 699 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 INPP5FQ9Y2H2 1132 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RBMX2Q9Y388 322 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 OCM2P0CE71 109 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 OCMP0CE72 109 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 KRT76Q01546 638 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 MAN2A1Q16706 1144 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TMPRSS6Q8IU80 811 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 AGPAT1Q99943 283 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TFCP2L1Q9NZI6 479 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 CYP26A1O43174 497 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 HNRNPRO43390 633 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 SRGNP10124 158 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 MYBPC2Q14324 1141 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 BTBD6Q96KE9 485 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 HIBADHP31937 336 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 S100A5P33763 92 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RALGDSQ12967 914 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RCN1Q15293 331 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 XKR9Q5GH70 373 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 MCRS1Q96EZ8 462 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 COL4A3BPQ9Y5P4 624 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GCNT3O95395 438 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 KRT19P08727 400 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 MLH1P40692 756 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 BARGINQ6ZT62 677 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PHTF1Q9UMS5 762 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 FAM47DPA6NHR8 397 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 BAIAP3O94812 1187 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TMCC1O94876 653 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TYK2P29597 1187 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 ALDH1A3P47895 512 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 UXS1Q8NBZ7 420 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GPAA1O43292 621 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GALCP54803 685 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 EFCAB3Q8N7B9 438 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PLBD2Q8NHP8 589 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 C1orf50Q9BV19 199 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RBM44Q6ZP01 1051 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 ATXN3P54252 364 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 KCNH2Q12809 1159 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 C9orf72Q96LT7 481 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 WNT8AQ9H1J5 351 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TFE3P19532 575 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 HLA-DPA1P20036 260 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TARSP26639 723 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TSPAN14Q8NG11 270 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 E2F7Q96AV8 911 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 NACC1Q96RE7 527 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 MRGBPQ9NV56 204 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 POTEFA5A3E0 1075 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 DEAF1O75398 565 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PPARGP37231 505 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 OVGP1Q12889 678 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 SGO1Q5FBB7 561 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 MCUQ8NE86 351 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PUS3Q9BZE2 481 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 NACA2Q9H009 215 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TRAPPC3O43617 180 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 EFCAB1Q9HAE3 211 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF180Q9UJW8 692 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PABPN1LA6NDY0 278 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 LPXNO60711 386 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PLA2G4BP0C869 781 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 POTEIP0CG38 1075 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 SERPINB10P48595 397 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TAS2R42Q7RTR8 314 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RTCBQ9Y3I0 505 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RHOBTB1O94844 696 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 WEE2P0C1S8 567 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PMLP29590 882 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 GCLCP48506 637 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 MTTPP55157 894 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 CRELD2Q6UXH1 353 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RNF19BQ6ZMZ0 732 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PCSK1NQ9UHG2 260 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 FIS1Q9Y3D6 152 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 FOXN3O00409 490 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 KRT7P08729 469 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PICALMQ13492 652 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TPTE2Q6XPS3 522 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms