RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SLC16A2P36021 539 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 STAT4Q14765 748 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 HLFQ16534 295 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 RASSF3Q86WH2 238 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 CSRNP1Q96S65 589 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 ANKZF1Q9H8Y5 726 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 SENP1Q9P0U3 644 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 TLK1Q9UKI8 766 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 ZNF804BA4D1E1 1349 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 SASH3O75995 380 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 KRT38O76015 456 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 DRAP1Q14919 205 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 ZNF577Q9BSK1 485 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 TRIM9Q9C026 710 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 MID2Q9UJV3 735 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 CDC42BPGQ6DT37 1551 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 KRT10P13645 584 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 TBC1D10BQ4KMP7 808 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 RABGAP1LQ5R372 815 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 RFX8Q6ZV50 586 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 SFR1Q86XK3 245 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 SUGP1Q8IWZ8 645 aaKnown RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 ELOA2Q8IYF1 753 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 SLC26A7Q8TE54 656 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 FAM96AQ9H5X1 160 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 ANKFY1Q9P2R3 1169 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 LRRIQ4A6NIV6 560 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 FTLP02792 175 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 FSCBQ5H9T9 825 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 C16orf87Q6PH81 154 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 KCTD1Q719H9 257 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 KCTD6Q8NC69 237 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 WNT8AQ9H1J5 351 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 TRAF3IP3Q9Y228 551 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 CDH16O75309 829 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 IL6STP40189 918 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 DDX42Q86XP3 938 aaKnown RBP eCLIP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 RBM41Q96IZ5 413 aaKnown RBP16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 DLGAP2Q9P1A6 1054 aa16.88■□□□□ 0.29
RBFOX1-212ENST00000550418 ZNF609O15014 1411 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 PITPNM2Q9BZ72 1349 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 TBC1D9BQ66K14 1250 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 ZBTB8OSQ8IWT0 167 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 PFASO15067 1338 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 DCLK2Q8N568 766 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 RAB21Q9UL25 225 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 SFI1A8K8P3 1242 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 MCF2P10911 925 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 KNOP1Q1ED39 458 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 TRMT10CQ7L0Y3 403 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 CCSER1Q9C0I3 900 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 LCMT1Q9UIC8 334 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 DBR1Q9UK59 544 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 TFR2Q9UP52 801 aa16.87■□□□□ 0.29
RBFOX1-212ENST00000550418 E9PMD0 336 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 CCDC22O60826 627 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 ALDH1B1P30837 517 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 ERVK-24P63145 666 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 MED21Q13503 144 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 USP38Q8NB14 1042 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 CPDO75976 1380 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 PTPRUQ92729 1446 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 DNAJC6O75061 913 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 HSPA4LO95757 839 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 ALAS1P13196 640 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 SCTRP47872 440 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 TRIM65Q6PJ69 517 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 MCUQ8NE86 351 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 RHOBTB3O94955 611 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 KITP10721 976 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 HSD17B3P37058 310 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 SESTD1Q86VW0 696 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 DEPDC1BQ8WUY9 529 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 KMT5AQ9NQR1 393 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 ADAM22Q9P0K1 906 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 FAM205CA6NFA0 338 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 EAPPQ56P03 285 aaPredicted RBP16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 NUP85Q9BW27 656 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 ZNF446Q9NWS9 450 aa16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 POLR1AO95602 1720 aaPredicted RBP16.86■□□□□ 0.29
RBFOX1-212ENST00000550418 ANP32DO95626 131 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 STAT2P52630 851 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 ORC2Q13416 577 aaPredicted RBP16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 C1orf54Q8WWF1 131 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 GFM2Q969S9 779 aaKnown RBP16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 ZBTB10Q96DT7 871 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 TRABDQ9H4I3 376 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 IQGAP1P46940 1657 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 GOLGA8MH3BSY2 632 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 HSPA8P11142 646 aaKnown RBP16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 SERPINB4P48594 390 aa16.85■□□□□ 0.29
RBFOX1-212ENST00000550418 NAALADL2Q58DX5 795 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms