RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PHF20L1A8MW92 1017 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 IPO5O00410 1097 aaKnown RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 NPM3O75607 178 aaKnown RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 RFX1P22670 979 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 AMPD2Q01433 879 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 TTLL12Q14166 644 aaPredicted RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 KDM7AQ6ZMT4 941 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 CATSPER3Q86XQ3 398 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 IRF2BP1Q8IU81 584 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 TAB3Q8N5C8 712 aaPredicted RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 BANK1Q8NDB2 785 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 ZNF564Q8TBZ8 553 aaPredicted RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 CAVIN3Q969G5 261 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 AGPAT1Q99943 283 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 PACSIN1Q9BY11 444 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 WNT8AQ9H1J5 351 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 TDRD3Q9H7E2 651 aaKnown RBP8.82□□□□□ -1
PRKAB1-207ENST00000542698 EMSYQ7Z589 1322 aa8.82□□□□□ -1
PRKAB1-207ENST00000542698 SGK1O00141 431 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 KLRC4O43908 158 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 RNF8O76064 485 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 BRAFP15056 766 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 CA4P22748 312 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 GCKP35557 465 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 POLGP54098 1239 aaPredicted RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 IL17AQ16552 155 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 FAM160B2Q86V87 743 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 SRRM1Q8IYB3 904 aaKnown RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 CNKSR2Q8WXI2 1034 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 CNKSR1Q969H4 720 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 CYFIP2Q96F07 1278 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 ERP44Q9BS26 406 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 HEMGNQ9BXL5 484 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 VCXQ9H320 206 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 MLXIPLQ9NP71 852 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 APEX2Q9UBZ4 518 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 PIK3C2AO00443 1686 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 RCCD1A6NED2 376 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 ZNF233A6NK53 670 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 SLC26A4O43511 780 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 NPR1P16066 1061 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 HNRNPH1P31943 449 aaKnown RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 HDLBPQ00341 1268 aaKnown RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 CEP55Q53EZ4 464 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 AGBL2Q5U5Z8 902 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 TRIM59Q8IWR1 403 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 MYCBPAPQ8TBZ2 947 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 MORC4Q8TE76 937 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 SEC16BQ96JE7 1060 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 RILPQ96NA2 401 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 NUP85Q9BW27 656 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 RIOX1Q9H6W3 641 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 PNMA2Q9UL42 364 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 ALG6Q9Y672 507 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 ZSCAN5CA6NGD5 496 aaPredicted RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 EIF2AK2P19525 551 aaKnown RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 LRRC14Q15048 493 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 MUM1Q2TAK8 710 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 CFAP157Q5JU67 520 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 RNF207Q6ZRF8 634 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 PARP9Q8IXQ6 854 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 SYT2Q8N9I0 419 aaPredicted RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 AENQ8WTP8 325 aaKnown RBP8.81□□□□□ -1
PRKAB1-207ENST00000542698 MTRQ99707 1265 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 TMEM51Q9NW97 253 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 ANKFY1Q9P2R3 1169 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 INTUQ9ULD6 942 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 MST1RQ04912 1400 aa8.81□□□□□ -1
PRKAB1-207ENST00000542698 FMN2Q9NZ56 1722 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 RASA4BC9J798 803 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 NOP56O00567 594 aaKnown RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 RASA4O43374 803 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 SYF2O95926 243 aaKnown RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 P4HBP07237 508 aaKnown RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 TMEM253P0C7T8 217 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 PON1P27169 355 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 PPP2R5AQ15172 486 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 ZNF662Q6ZS27 426 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 C3orf67Q6ZVT6 689 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 CCHCR1Q8TD31 782 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 SCFD1Q8WVM8 642 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 LXNQ9BS40 222 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 CARD9Q9H257 536 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 TUFT1Q9NNX1 390 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 BLOC1S4Q9NUP1 217 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 REXO2Q9Y3B8 237 aaKnown RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 SLC16A4O15374 487 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 SORBS3O60504 671 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 GGPS1O95749 300 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 YWHAEP62258 255 aaKnown RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 ZC2HC1CQ53FD0 456 aaPredicted RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 MEI1Q5TIA1 1274 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 FAM47EQ6ZV65 393 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 MIGA2Q7L4E1 593 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 CCDC110Q8TBZ0 833 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 XPO6Q96QU8 1125 aaKnown RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 MKNK1Q9BUB5 465 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 TXLNGQ9NUQ3 528 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms