RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 WDR64B1ANS9 1081 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 N4BP1O75113 896 aaKnown RBP19.5■□□□□ 0.71
GNE-204ENST00000539208 TRIM49P0CI25 452 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 TRIM49CP0CI26 452 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 MATR3P43243 847 aaKnown RBP eCLIP19.5■□□□□ 0.71
GNE-204ENST00000539208 RPS6KA1Q15418 735 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 SLFN11Q7Z7L1 901 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 MICALL2Q8IY33 904 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 LMO3Q8TAP4 145 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 VTI1AQ96AJ9 217 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 GPR88Q9GZN0 384 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 PARP14Q460N5 1801 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 DOCK1Q14185 1865 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 ZC3H4Q9UPT8 1303 aaKnown RBP19.5■□□□□ 0.71
GNE-204ENST00000539208 GMPSP49915 693 aaPredicted RBP19.5■□□□□ 0.71
GNE-204ENST00000539208 BACE1P56817 501 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 C8orf74Q6P047 294 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 TPCN2Q8NHX9 752 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 TAF4BQ92750 862 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 PBKQ96KB5 322 aa19.5■□□□□ 0.71
GNE-204ENST00000539208 LTBP3Q9NS15 1303 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 MAFGO15525 162 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 KIF4AO95239 1232 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 ARHGEF16Q5VV41 709 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 SAMD7Q7Z3H4 446 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 HAUS6Q7Z4H7 955 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 SCYL3Q8IZE3 742 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 SENP7Q9BQF6 1050 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 AS3MTQ9HBK9 375 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 CNOT7Q9UIV1 285 aaKnown RBP19.49■□□□□ 0.71
GNE-204ENST00000539208 A0A0U1RQG5 324 aaPredicted RBP19.49■□□□□ 0.71
GNE-204ENST00000539208 PMM2O15305 246 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 ATP9AO75110 1047 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 MYCLP12524 364 aaPredicted RBP19.49■□□□□ 0.71
GNE-204ENST00000539208 NOP2P46087 812 aaKnown RBP19.49■□□□□ 0.71
GNE-204ENST00000539208 OAZ1P54368 228 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 NBPF12Q5TAG4 269 aaPredicted RBP19.49■□□□□ 0.71
GNE-204ENST00000539208 MAEAQ7L5Y9 396 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 LNX1Q8TBB1 728 aaPredicted RBP19.49■□□□□ 0.71
GNE-204ENST00000539208 U2AF1L4Q8WU68 220 aaKnown RBP19.49■□□□□ 0.71
GNE-204ENST00000539208 VPS18Q9P253 973 aa19.49■□□□□ 0.71
GNE-204ENST00000539208 CCNE2O96020 404 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 VAMP7P51809 220 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 EPHB4P54760 987 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 CETN1Q12798 172 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 PLS1Q14651 629 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 KIF22Q14807 665 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 UGCGQ16739 394 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 VSIG10LQ86VR7 867 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 SYCE1Q8N0S2 351 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 USP38Q8NB14 1042 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 XXYLT1Q8NBI6 393 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 GPRASP2Q96D09 838 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 ATG4CQ96DT6 458 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 CCDC43Q96MW1 224 aaKnown RBP19.48■□□□□ 0.71
GNE-204ENST00000539208 TMEM59LQ9UK28 342 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 ZHX1Q9UKY1 873 aaPredicted RBP19.48■□□□□ 0.71
GNE-204ENST00000539208 USP20Q9Y2K6 914 aa19.48■□□□□ 0.71
GNE-204ENST00000539208 GOLGB1Q14789 3259 aaKnown RBP19.48■□□□□ 0.71
GNE-204ENST00000539208 BACH1O14867 736 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 TBC1D10BQ4KMP7 808 aaPredicted RBP19.47■□□□□ 0.71
GNE-204ENST00000539208 PHLDB3Q6NSJ2 640 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 ZNF746Q6NUN9 644 aaPredicted RBP19.47■□□□□ 0.71
GNE-204ENST00000539208 EMBQ6PCB8 327 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 ZNF280CQ8ND82 737 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 REPS2Q8NFH8 660 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 RNF146Q9NTX7 359 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 TCEAL9Q9UHQ7 104 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 ADAMTS5Q9UNA0 930 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 PACSIN2Q9UNF0 486 aaPredicted RBP19.47■□□□□ 0.71
GNE-204ENST00000539208 FAN1Q9Y2M0 1017 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 FZD9O00144 591 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 SYF2O95926 243 aaKnown RBP19.47■□□□□ 0.71
GNE-204ENST00000539208 TMEM253P0C7T8 217 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 CCND2P30279 289 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 SLC7A5Q01650 507 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 NSMFQ6X4W1 530 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 IFT20Q8IY31 132 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 GSPT2Q8IYD1 628 aaKnown RBP19.47■□□□□ 0.71
GNE-204ENST00000539208 RDH13Q8NBN7 331 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 ACTRT1Q8TDG2 376 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 HVCN1Q96D96 273 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 MAF1Q9H063 256 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 GDF3Q9NR23 364 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 HSPBP1Q9NZL4 362 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 SUCLA2Q9P2R7 463 aaPredicted RBP19.47■□□□□ 0.71
GNE-204ENST00000539208 STXBP5LQ9Y2K9 1186 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 NCANO14594 1321 aa19.47■□□□□ 0.71
GNE-204ENST00000539208 ZBTB48P10074 688 aaPredicted RBP19.46■□□□□ 0.71
GNE-204ENST00000539208 PTPRAP18433 802 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 GALCP54803 685 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 BAATQ14032 418 aaPredicted RBP19.46■□□□□ 0.71
GNE-204ENST00000539208 CAVIN3Q969G5 261 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 CBWD1Q9BRT8 395 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 MOV10L1Q9BXT6 1211 aaKnown RBP19.46■□□□□ 0.71
GNE-204ENST00000539208 PCIF1Q9H4Z3 704 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 EMSYQ7Z589 1322 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms