RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 MAP4K3Q8IVH8 894 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 FAM186BQ8IYM0 893 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 NEK11Q8NG66 645 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 NUCKS1Q9H1E3 243 aaKnown RBP22.27■■□□□ 1.16
CDH5-202ENST00000539168 GPBP1L1Q9HC44 474 aaPredicted RBP22.27■■□□□ 1.16
CDH5-202ENST00000539168 ZFYVE28Q9HCC9 887 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 XPNPEP1Q9NQW7 623 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 TBX20Q9UMR3 447 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 SLC16A4O15374 487 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 GOLGA8FQ08AF8 430 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 GOLGA8DPQ0D2H9 430 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 KCNH2Q12809 1159 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 C17orf53Q8N3J3 647 aaPredicted RBP22.26■■□□□ 1.15
CDH5-202ENST00000539168 ATP8B4Q8TF62 1192 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 POLR3FQ9H1D9 316 aaPredicted RBP22.26■■□□□ 1.15
CDH5-202ENST00000539168 SRCAPQ6ZRS2 3230 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 GTPBP10A4D1E9 387 aaKnown RBP22.26■■□□□ 1.15
CDH5-202ENST00000539168 TLR2O60603 784 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 NAMPTP43490 491 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 HSDL1Q3SXM5 330 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 E4F1Q66K89 784 aaPredicted RBP22.26■■□□□ 1.15
CDH5-202ENST00000539168 TCP11Q8WWU5 503 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 TINF2Q9BSI4 451 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 MMRN2Q9H8L6 949 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 CPA4Q9UI42 421 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 MCM3APO60318 1980 aa22.26■■□□□ 1.15
CDH5-202ENST00000539168 PHLPP2Q6ZVD8 1323 aa22.25■■□□□ 1.15
CDH5-202ENST00000539168 EXOC3O60645 756 aa22.25■■□□□ 1.15
CDH5-202ENST00000539168 MAFO75444 373 aaPredicted RBP22.25■■□□□ 1.15
CDH5-202ENST00000539168 IQSEC1Q6DN90 963 aa22.25■■□□□ 1.15
CDH5-202ENST00000539168 CEP89Q96ST8 783 aa22.25■■□□□ 1.15
CDH5-202ENST00000539168 DENND3A2RUS2 1198 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 HBP1O60381 514 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 ARL2P36404 184 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 CDK17Q00537 523 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 MAP2K5Q13163 448 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 C17orf99Q6UX52 265 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 INTS8Q75QN2 995 aaKnown RBP22.24■■□□□ 1.15
CDH5-202ENST00000539168 PPTC7Q8NI37 304 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 BORCS6Q96GS4 357 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 KATNBL1Q9H079 304 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 ERAP1Q9NZ08 941 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 ARHGAP28Q9P2N2 729 aa22.24■■□□□ 1.15
CDH5-202ENST00000539168 HOXC6P09630 235 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 KRT13P13646 458 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 ARHGAP1Q07960 439 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 PTPN14Q15678 1187 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 BRDTQ58F21 947 aaPredicted RBP22.23■■□□□ 1.15
CDH5-202ENST00000539168 MORN1Q5T089 497 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 IER5Q5VY09 327 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 KSR1Q8IVT5 923 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 XXYLT1Q8NBI6 393 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 PDGFCQ9NRA1 345 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 DAAM1Q9Y4D1 1078 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 KIAA0391O15091 583 aaKnown RBP22.23■■□□□ 1.15
CDH5-202ENST00000539168 SNAI1O95863 264 aaPredicted RBP22.23■■□□□ 1.15
CDH5-202ENST00000539168 CASP4P49662 377 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 MEA1Q16626 185 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 SOCS4Q8WXH5 440 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 SLC35C1Q96A29 364 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 PLCB1Q9NQ66 1216 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 CEP72Q9P209 647 aa22.23■■□□□ 1.15
CDH5-202ENST00000539168 RASSF10A6NK89 507 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 TMEM88BA6NKF7 163 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 CCDC175P0C221 793 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 HNRNPH3P31942 346 aaKnown RBP22.22■■□□□ 1.15
CDH5-202ENST00000539168 TM4SF4P48230 202 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 CYP2J2P51589 502 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 ENPEPQ07075 957 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 ACVR2BQ13705 512 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 DUSP28Q4G0W2 176 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 DCAF17Q5H9S7 520 aaPredicted RBP22.22■■□□□ 1.15
CDH5-202ENST00000539168 TCERG1LQ5VWI1 586 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 CACNA2D4Q7Z3S7 1137 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 BSNDQ8WZ55 320 aa22.22■■□□□ 1.15
CDH5-202ENST00000539168 ABT1Q9ULW3 272 aaKnown RBP22.22■■□□□ 1.15
CDH5-202ENST00000539168 FAM155AB1AL88 458 aaPredicted RBP22.21■■□□□ 1.15
CDH5-202ENST00000539168 N4BP1O75113 896 aaKnown RBP22.21■■□□□ 1.15
CDH5-202ENST00000539168 PPFIA4O75335 1185 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 ALDH1A1P00352 501 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 GARTP22102 1010 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 KCNMA1Q12791 1236 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 STRN3Q13033 797 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 MXD4Q14582 209 aaPredicted RBP22.21■■□□□ 1.15
CDH5-202ENST00000539168 PLCB4Q15147 1175 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 GBP6Q6ZN66 633 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 USP37Q86T82 979 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 DEPTORQ8TB45 409 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 PPP1R13BQ96KQ4 1090 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 TMEM134Q9H6X4 195 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 FAM207AQ9NSI2 230 aaPredicted RBP22.21■■□□□ 1.15
CDH5-202ENST00000539168 HSPBP1Q9NZL4 362 aa22.21■■□□□ 1.15
CDH5-202ENST00000539168 BFSP1Q12934 665 aa22.2■■□□□ 1.15
CDH5-202ENST00000539168 EXOC3L4Q17RC7 722 aa22.2■■□□□ 1.15
CDH5-202ENST00000539168 ZNF484Q5JVG2 852 aa22.2■■□□□ 1.15
CDH5-202ENST00000539168 NYAP1Q6ZVC0 841 aa22.2■■□□□ 1.15
CDH5-202ENST00000539168 CCDC170Q8IYT3 715 aa22.2■■□□□ 1.15
CDH5-202ENST00000539168 SYN2Q92777 582 aaPredicted RBP22.2■■□□□ 1.15
CDH5-202ENST00000539168 COPS5Q92905 334 aa22.2■■□□□ 1.15
CDH5-202ENST00000539168 TRMT1Q9NXH9 659 aaKnown RBP22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms