RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CLIC2O15247 247 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 PPP2R2AP63151 447 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 DHX34Q14147 1143 aaKnown RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 ABCB5Q2M3G0 1257 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 USH1GQ495M9 461 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CBWD6Q4V339 395 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CBWD3Q5JTY5 395 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CBWD5Q5RIA9 395 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 STRIP1Q5VSL9 837 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 KCNV1Q6PIU1 500 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 RHOT2Q8IXI1 618 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CYP2W1Q8TAV3 490 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CTNNBL1Q8WYA6 563 aaPredicted RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 GJD4Q96KN9 370 aaPredicted RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 CEP89Q96ST8 783 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 RABEP2Q9H5N1 569 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 BCAS3Q9H6U6 928 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 SERPINA10Q9UK55 444 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 PPP1R9AQ9ULJ8 1098 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 PFASO15067 1338 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 ZNF536O15090 1300 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 GMNCA6NCL1 334 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 FAM196BA6NMK8 535 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 TULP1O00294 542 aaPredicted RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 P4HA2O15460 535 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 MTA2O94776 668 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 FGGP02679 453 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 HSPA6P17066 643 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 VCAM1P19320 739 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 NMT1P30419 496 aaKnown RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 ALDH1B1P30837 517 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 PRELPP51888 382 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 SEC24CP53992 1094 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 MYL7Q01449 175 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 BFSP1Q12934 665 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 DOK7Q18PE1 504 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 DACT2Q5SW24 774 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 HS2ST1Q7LGA3 356 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 C12orf56Q8IXR9 622 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 MYCT1Q8N699 235 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 OTUD6BQ8N6M0 293 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CENPTQ96BT3 561 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 EPB41L4BQ9H329 900 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 VCPKMTQ9H867 229 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CNOT10Q9H9A5 744 aaKnown RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 FRMD4BQ9Y2L6 1034 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 SMCHD1A6NHR9 2005 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 SYNGAP1Q96PV0 1343 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 GOLGA6L10A0A0M3HER8 536 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 MIF4GDA9UHW6 222 aaKnown RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 PMM2O15305 246 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 ENTPD3O75355 529 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 HOXA13P31271 388 aaPredicted RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 GBP1P32455 592 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 SNAP25P60880 206 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 SETQ01105 290 aaPredicted RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 ACTN3Q08043 901 aaPredicted RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 CTTNQ14247 550 aaKnown RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 SKIDA1Q1XH10 827 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 ZC2HC1CQ53FD0 456 aaPredicted RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 LRCH2Q5VUJ6 765 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 OR2W6PQ8NHA6 318 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 NEK9Q8TD19 979 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 UBLCP1Q8WVY7 318 aaPredicted RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 ARHGEF26Q96DR7 871 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 DYDC2Q96IM9 177 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 FMO2Q99518 471 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 CELF4Q9BZC1 486 aaKnown RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 WDR11Q9BZH6 1224 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 DEFB129Q9H1M3 183 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 E7EVH7 732 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 MAPK13O15264 365 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 GGPS1O95749 300 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 VIL1P09327 827 aaKnown RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 HNRNPH1P31943 449 aaKnown RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 HPDP32754 393 aaPredicted RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 USP8P40818 1118 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 JAG1P78504 1218 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 DR1Q01658 176 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 MAPK7Q13164 816 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 ALCAMQ13740 583 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 COG2Q14746 738 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 PIGOQ8TEQ8 1089 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 P3H4Q92791 437 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 PGM2Q96G03 612 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 NACC1Q96RE7 527 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 PSMD1Q99460 953 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 ERP44Q9BS26 406 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 FAM129AQ9BZQ8 928 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 THAP2Q9H0W7 228 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 IKZF4Q9H2S9 585 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 ACTR5Q9H9F9 607 aaPredicted RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 CNOT8Q9UFF9 292 aaKnown RBP7.22□□□□□ -1.25
CDH12-203ENST00000517378 PCYOX1Q9UHG3 505 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 COG5Q9UP83 839 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 NR2E1Q9Y466 385 aa7.22□□□□□ -1.25
CDH12-203ENST00000517378 ZNFX1Q9P2E3 1918 aaKnown RBP7.21□□□□□ -1.25
CDH12-203ENST00000517378 UBAP1LF5GYI3 381 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms