RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 QPCTQ16769 361 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 ODR4Q5SWX8 454 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 RNF187Q5TA31 235 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 CCDC174Q6PII3 467 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 CCDC26Q8TAB7 109 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 SLC20A1Q8WUM9 679 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 HOOK2Q96ED9 719 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 SLITRK6Q9H5Y7 841 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 INTUQ9ULD6 942 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 EIF3DO15371 548 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 PPP1R12BO60237 982 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 MAGOHP61326 146 aaKnown RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 PLCD3Q8N3E9 789 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 MAGOHBQ96A72 148 aaKnown RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 IDI2Q9BXS1 227 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 APEX2Q9UBZ4 518 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 UTP11Q9Y3A2 253 aaKnown RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 CYP3A4P08684 503 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 TMEM253P0C7T8 217 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 LMNB1P20700 586 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 ANXA13P27216 316 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 HNRNPH1P31943 449 aaKnown RBP14.11□□□□□ -0.15
PTPN7-217ENST00000495688 MARCKSL1P49006 195 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 FNTAP49354 379 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 NPEPPSP55786 919 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 KRT71Q3SY84 523 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 HS2ST1Q7LGA3 356 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 ACER1Q8TDN7 264 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 SEC14L1Q92503 715 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 CYFIP2Q96F07 1278 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 PCIF1Q9H4Z3 704 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 DDX39AO00148 427 aaKnown RBP14.11□□□□□ -0.15
PTPN7-217ENST00000495688 ARP10275 920 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 SLC15A2Q16348 729 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 DACT2Q5SW24 774 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 UBAP2Q5T6F2 1119 aaKnown RBP14.11□□□□□ -0.15
PTPN7-217ENST00000495688 MMS22LQ6ZRQ5 1243 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 MDM1Q8TC05 714 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 FRMD4BQ9Y2L6 1034 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 FRMPD4Q14CM0 1322 aa14.11□□□□□ -0.15
PTPN7-217ENST00000495688 EXOC3O60645 756 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 GAS7O60861 476 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 TRIM37O94972 964 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 SHBGP04278 402 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 NPR1P16066 1061 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 TNFAIP3P21580 790 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 MYL7Q01449 175 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 SPRED3Q2MJR0 410 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 ZNF746Q6NUN9 644 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-217ENST00000495688 PODNQ7Z5L7 613 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 ZSWIM2Q8NEG5 633 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 KRT35Q92764 455 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 ZNF622Q969S3 477 aaKnown RBP eCLIP14.1□□□□□ -0.151e-6■■□□□ 13.3
PTPN7-217ENST00000495688 FMO2Q99518 471 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 SH2D3AQ9BRG2 576 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 UNC45AQ9H3U1 944 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 DMAC2Q9NW81 257 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 PKD2L1Q9P0L9 805 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 NCANO14594 1321 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 MYH11P35749 1972 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 H0YHG0 523 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 GUCY2CP25092 1073 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 PTENP60484 403 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 PPP2R2AP63151 447 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 DR1Q01658 176 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 TBC1D10BQ4KMP7 808 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-217ENST00000495688 RBM26Q5T8P6 1007 aaKnown RBP14.1□□□□□ -0.15
PTPN7-217ENST00000495688 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 RUFY4Q6ZNE9 571 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 TRMT1LQ7Z2T5 733 aaKnown RBP14.1□□□□□ -0.15
PTPN7-217ENST00000495688 GOPCQ9HD26 462 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 TUFT1Q9NNX1 390 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 ACP6Q9NPH0 428 aa14.1□□□□□ -0.15
PTPN7-217ENST00000495688 GMNCA6NCL1 334 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 TMEM110-MUSTN1A8MSY1 372 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 PIK3CDO00329 1044 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 STAT2P52630 851 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 GTF2A1P52655 376 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-217ENST00000495688 PLTPP55058 493 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 BFSP1Q12934 665 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ZYXQ15942 572 aaKnown RBP14.09□□□□□ -0.15
PTPN7-217ENST00000495688 SYCP3Q8IZU3 236 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 DAW1Q8N136 415 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ARFGAP2Q8N6H7 521 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 LMO3Q8TAP4 145 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 C18orf8Q96DM3 657 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 CSRNP1Q96S65 589 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 SNX24Q9Y343 169 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 TRAPPC3O43617 180 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 CAND2O75155 1236 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 PRELPP51888 382 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ZNF131P52739 623 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 SF3A3Q12874 501 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTPN7-217ENST00000495688 PPP2R5CQ13362 524 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 BIRC3Q13489 604 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 MTMR3Q13615 1198 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 BTNL9Q6UXG8 535 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 CPNE8Q86YQ8 564 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms