RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 KIAA1024Q9UPX6 916 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 DICER1Q9UPY3 1922 aaKnown RBP16.12■□□□□ 0.17
TTC3-219ENST00000485402 KIF4AO95239 1232 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 PTPRAP18433 802 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 ABCB4P21439 1286 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 EPHX2P34913 555 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 HMGCS2P54868 508 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 RUFY4Q6ZNE9 571 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 METTL13Q8N6R0 699 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 TRIM51Q9BSJ1 452 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 ISCUQ9H1K1 167 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 PVALEFA0A1B0GWK0 134 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 PPP2R2AP63151 447 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 NEDD9Q14511 834 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 ALKBH5Q6P6C2 394 aaKnown RBP16.12■□□□□ 0.17
TTC3-219ENST00000485402 CYB5D1Q6P9G0 228 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 TAX1BP1Q86VP1 789 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 PARP9Q8IXQ6 854 aa16.12■□□□□ 0.17
TTC3-219ENST00000485402 NOC2LQ9Y3T9 749 aaKnown RBP16.12■□□□□ 0.17
TTC3-219ENST00000485402 TNFRSF8P28908 595 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 HSPA9P38646 679 aaKnown RBP16.11■□□□□ 0.17
TTC3-219ENST00000485402 IFNAR2P48551 515 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 GKAP1Q5VSY0 366 aaPredicted RBP16.11■□□□□ 0.17
TTC3-219ENST00000485402 HIBCHQ6NVY1 386 aaPredicted RBP16.11■□□□□ 0.17
TTC3-219ENST00000485402 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 FEM1BQ9UK73 627 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 CTDP1Q9Y5B0 961 aaPredicted RBP16.11■□□□□ 0.17
TTC3-219ENST00000485402 LLGL1Q15334 1064 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 ZNF280CQ8ND82 737 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 TCP11Q8WWU5 503 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 KIAA1683Q9H0B3 1180 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 EMILIN3Q9NT22 766 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 CLTAP09496 248 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 VCAM1P19320 739 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 PPP4R3AQ6IN85 833 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 ZNF571Q7Z3V5 609 aaPredicted RBP16.11■□□□□ 0.17
TTC3-219ENST00000485402 U2AF1L4Q8WU68 220 aaKnown RBP16.11■□□□□ 0.17
TTC3-219ENST00000485402 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
TTC3-219ENST00000485402 PNMA2Q9UL42 364 aa16.11■□□□□ 0.17
TTC3-219ENST00000485402 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
TTC3-219ENST00000485402 SLCO1A2P46721 670 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 GJB7Q6PEY0 223 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 FAM160B2Q86V87 743 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 PLCB1Q9NQ66 1216 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 MEIS2O14770 477 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 BACE1P56817 501 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
TTC3-219ENST00000485402 MOB2Q70IA6 237 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 FUKQ8N0W3 1084 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 ANO3Q9BYT9 981 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 AS3MTQ9HBK9 375 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 STK17AQ9UEE5 414 aa16.1■□□□□ 0.17
TTC3-219ENST00000485402 USP2O75604 605 aaPredicted RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 NR2F2P24468 414 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 GBP2P32456 591 aaPredicted RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 ZNF211Q13398 564 aaPredicted RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 LPAR1Q92633 364 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 HVCN1Q96D96 273 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 PPP2R3BQ9Y5P8 575 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 WDR46O15213 610 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 FAM133BQ5BKY9 247 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 GPBP1Q86WP2 473 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 LDHDQ86WU2 507 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 BANK1Q8NDB2 785 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 ZNF112Q9UJU3 913 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 CCPG1Q9ULG6 757 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 TPX2Q9ULW0 747 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 PCDHA12Q9UN75 941 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 MEIS1O00470 390 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 TRAPPC3O43617 180 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 FGGP02679 453 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 VIMP08670 466 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 EZRP15311 586 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 UBXN2AP68543 259 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 NAA25Q14CX7 972 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 CD302Q8IX05 232 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 MREGQ8N565 214 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
TTC3-219ENST00000485402 NUCKS1Q9H1E3 243 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 RAVER2Q9HCJ3 691 aaKnown RBP16.09■□□□□ 0.17
TTC3-219ENST00000485402 CETN3O15182 167 aa16.08■□□□□ 0.17
TTC3-219ENST00000485402 ELF1P32519 619 aa16.08■□□□□ 0.17
TTC3-219ENST00000485402 SCTRP47872 440 aa16.08■□□□□ 0.17
TTC3-219ENST00000485402 CLNS1AP54105 237 aaKnown RBP16.08■□□□□ 0.17
TTC3-219ENST00000485402 P2RX7Q99572 595 aaKnown RBP16.08■□□□□ 0.17
TTC3-219ENST00000485402 DDX25Q9UHL0 483 aaKnown RBP16.08■□□□□ 0.17
TTC3-219ENST00000485402 UTP11Q9Y3A2 253 aaKnown RBP16.08■□□□□ 0.17
TTC3-219ENST00000485402 RASSF9O75901 435 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 PLTPP55058 493 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 ANKRD20A8PQ5CZ79 823 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 GLT8D2Q9H1C3 349 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 ZNF408Q9H9D4 720 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms