RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 KIFAP3Q92845 792 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 ZNF668Q96K58 619 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 SPATA32Q96LK8 384 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 POLR3FQ9H1D9 316 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 IFT122Q9HBG6 1241 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 ERVK-5Q9HDB9 667 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 SIP14410 1827 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 LOXHD1Q8IVV2 1947 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 AMHP03971 560 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 ATP2A2P16615 1042 aaKnown RBP12□□□□□ -0.49
ATG4B-219ENST00000479941 GLRA2P23416 452 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 GUCY2CP25092 1073 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 PHKA2P46019 1235 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
ATG4B-219ENST00000479941 CAPSQ13938 189 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 PPP2R5AQ15172 486 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
ATG4B-219ENST00000479941 LARP4BQ92615 738 aaKnown RBP12□□□□□ -0.49
ATG4B-219ENST00000479941 RAD54LQ92698 747 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 IFT74Q96LB3 600 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 DRC1Q96MC2 740 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 RUSC1Q9BVN2 902 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 NFKBIZQ9BYH8 718 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 GPRC5CQ9NQ84 441 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 BLOC1S4Q9NUP1 217 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 KCNG1Q9UIX4 513 aa12□□□□□ -0.49
ATG4B-219ENST00000479941 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
ATG4B-219ENST00000479941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-219ENST00000479941 ENPP3O14638 875 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 ZSCAN20P17040 1043 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-219ENST00000479941 NAMPTP43490 491 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 PTENP60484 403 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 ADALQ6DHV7 355 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 SHC4Q6S5L8 630 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 CATSPER4Q7RTX7 472 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-219ENST00000479941 TMX1Q9H3N1 280 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 C17orf75Q9HAS0 396 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 CHST12Q9NRB3 414 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 TSHZ2Q9NRE2 1034 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 FAM13BQ9NYF5 915 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 CHMP5Q9NZZ3 219 aa11.99□□□□□ -0.49
ATG4B-219ENST00000479941 DENND3A2RUS2 1198 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 LRRIQ4A6NIV6 560 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 HIP1RO75146 1068 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 CSDE1O75534 798 aaKnown RBP11.98□□□□□ -0.49
ATG4B-219ENST00000479941 STAT6P42226 847 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 DEFB103AP81534 67 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 DHX8Q14562 1220 aaKnown RBP11.98□□□□□ -0.49
ATG4B-219ENST00000479941 MCM6Q14566 821 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 NAALADL2Q58DX5 795 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 RESP18Q5W5W9 173 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 CDCA2Q69YH5 1023 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-219ENST00000479941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
ATG4B-219ENST00000479941 SV2BQ7L1I2 683 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 RTN4RL1Q86UN2 441 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-219ENST00000479941 GPBP1Q86WP2 473 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 HERC6Q8IVU3 1022 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 ZBTB8OSQ8IWT0 167 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 PDILTQ8N807 584 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 IQUBQ8NA54 791 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 LRRC15Q8TF66 581 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 LINC01599Q8WXQ3 324 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 TOP1MTQ969P6 601 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 PYM1Q9BRP8 204 aaKnown RBP11.98□□□□□ -0.49
ATG4B-219ENST00000479941 PANK2Q9BZ23 570 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 C2orf40Q9H1Z8 148 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 CUEDC2Q9H467 287 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 MINDY3Q9H8M7 445 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 RGS18Q9NS28 235 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 C1orf112Q9NSG2 853 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-219ENST00000479941 ODF2LQ9ULJ1 636 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 MICAL3Q7RTP6 2002 aa11.98□□□□□ -0.49
ATG4B-219ENST00000479941 CHD9Q3L8U1 2897 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 A0A087X0B3 334 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 INO80B-WBP1J3KQ70 363 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 ERLIN2O94905 339 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 GJB5O95377 273 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 KRT18P05783 430 aaKnown RBP11.97□□□□□ -0.49
ATG4B-219ENST00000479941 FGFR4P22455 802 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 CMA1P23946 247 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 EFNA5P52803 228 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 NCBP1Q09161 790 aaKnown RBP11.97□□□□□ -0.49
ATG4B-219ENST00000479941 DMP1Q13316 513 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-219ENST00000479941 DSC3Q14574 896 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 RAB30Q15771 203 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 ARSHQ5FYA8 562 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 FAM109BQ6ICB4 259 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-219ENST00000479941 SLC24A5Q71RS6 500 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 DAW1Q8N136 415 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 DEPTORQ8TB45 409 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 BSNDQ8WZ55 320 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 PRIMPOLQ96LW4 560 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 IPO9Q96P70 1041 aaKnown RBP11.97□□□□□ -0.49
ATG4B-219ENST00000479941 ADAM2Q99965 735 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms