RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 PPP2R5AQ15172 486 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 C11orf57Q6ZUT1 292 aaPredicted RBP13.08□□□□□ -0.32
RNF13-208ENST00000467996 RHPN2Q8IUC4 686 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.32
RNF13-208ENST00000467996 PRPF31Q8WWY3 499 aaKnown RBP13.08□□□□□ -0.32
RNF13-208ENST00000467996 IFT74Q96LB3 600 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 MAP7D2Q96T17 732 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 KIFC3Q9BVG8 833 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 GTPBP4Q9BZE4 634 aaKnown RBP13.08□□□□□ -0.32
RNF13-208ENST00000467996 FAM49AQ9H0Q0 323 aaPredicted RBP13.08□□□□□ -0.32
RNF13-208ENST00000467996 AKT3Q9Y243 479 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 ADGRA3Q8IWK6 1321 aa13.08□□□□□ -0.32
RNF13-208ENST00000467996 CCDC169A6NNP5 214 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 ARVCFO00192 962 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 SLC16A4O15374 487 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 GCNT3O95395 438 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 VTNP04004 478 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
RNF13-208ENST00000467996 PTGISQ16647 500 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 ANO6Q4KMQ2 910 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 COBLL1Q53SF7 1204 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 EPM2AIP1Q7L775 607 aaPredicted RBP13.07□□□□□ -0.32
RNF13-208ENST00000467996 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 KSR1Q8IVT5 923 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 KIAA0319LQ8IZA0 1049 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 SPIRE2Q8WWL2 714 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 DNAJC25Q9H1X3 360 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 KMT5AQ9NQR1 393 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 TRMT13Q9NUP7 481 aaKnown RBP13.07□□□□□ -0.32
RNF13-208ENST00000467996 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
RNF13-208ENST00000467996 LRRIQ4A6NIV6 560 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
RNF13-208ENST00000467996 ASAP2O43150 1006 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 B4GALT4O60513 344 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 PPP1R37O75864 691 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 COL6A1P12109 1028 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 PRCPP42785 496 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 SMTNP53814 917 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 TFDP1Q14186 410 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 ZC2HC1CQ53FD0 456 aaPredicted RBP13.06□□□□□ -0.32
RNF13-208ENST00000467996 CDCA2Q69YH5 1023 aaPredicted RBP13.06□□□□□ -0.32
RNF13-208ENST00000467996 TAF2Q6P1X5 1199 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 ZNF720Q7Z2F6 126 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 HAUS6Q7Z4H7 955 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 MYOCDQ8IZQ8 938 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 ADSSL1Q8N142 457 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 RNF149Q8NC42 400 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 SLC17A8Q8NDX2 589 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 TMEM161BQ8NDZ6 487 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 DEPTORQ8TB45 409 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 DNAJB3Q8WWF6 145 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 WNT8BQ93098 351 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 NLRP4Q96MN2 994 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 PPP1R16BQ96T49 567 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
RNF13-208ENST00000467996 STRA6Q9BX79 667 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 SEZ6LQ9BYH1 1024 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 SENP6Q9GZR1 1112 aaPredicted RBP13.06□□□□□ -0.32
RNF13-208ENST00000467996 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 ARHGAP28Q9P2N2 729 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 DACH1Q9UI36 760 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 UBE4BO95155 1302 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 PHLPP2Q6ZVD8 1323 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 ZMYM2Q9UBW7 1377 aa13.06□□□□□ -0.32
RNF13-208ENST00000467996 ALPK3Q96L96 1907 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 SRGAP2CP0DJJ0 459 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 CAPN2P17655 700 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 PPP1R2P41236 205 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 CDK7P50613 346 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 GPC3P51654 580 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 TMEM62Q0P6H9 643 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 PTK7Q13308 1070 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 STIM1Q13586 685 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 ALCAMQ13740 583 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 BMT2Q1RMZ1 405 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 KLHL10Q6JEL2 608 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
RNF13-208ENST00000467996 DHX38Q92620 1227 aaKnown RBP13.05□□□□□ -0.32
RNF13-208ENST00000467996 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 ZNF668Q96K58 619 aaPredicted RBP13.05□□□□□ -0.32
RNF13-208ENST00000467996 KCNG1Q9UIX4 513 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 CTNND2Q9UQB3 1225 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 NOD1Q9Y239 953 aa13.05□□□□□ -0.32
RNF13-208ENST00000467996 A0A087WZ62 844 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 DENND3A2RUS2 1198 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 H0YCG3 227 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 PSMA7O14818 248 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 GPR32O75388 356 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 PRPF6O94906 941 aaKnown RBP13.04□□□□□ -0.32
RNF13-208ENST00000467996 KIF20AO95235 890 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 NLRP11P59045 1033 aaKnown RBP13.04□□□□□ -0.32
RNF13-208ENST00000467996 GTF2BQ00403 316 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms