RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 MTBPQ96DY7 904 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 EPAS1Q99814 870 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 MRPS26Q9BYN8 205 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 SLC5A4Q9NY91 659 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 TLR7Q9NYK1 1049 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF233A6NK53 670 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 CYTH3O43739 400 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 TNFAIP8O95379 198 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 OR52Z1P0C646 297 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 CPA3P15088 417 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 PDAP1Q13442 181 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 CDCA2Q69YH5 1023 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 NCAPG2Q86XI2 1143 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 TMEM237Q96Q45 408 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 LGR6Q9HBX8 967 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 TMEM165Q9HC07 324 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 ANLNQ9NQW6 1124 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 PPARGC1AQ9UBK2 798 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 HBS1LQ9Y450 684 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 CFAP69A5D8W1 941 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 POC1B-GALNT4F8VUJ3 575 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 ITIH2P19823 946 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 USP11P51784 963 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 MCL1Q07820 350 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 SLC18A3Q16572 532 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 SRRM1Q8IYB3 904 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 ERP44Q9BS26 406 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 EHD4Q9H223 541 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 DISC1Q9NRI5 854 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 CARD8Q9Y2G2 431 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 UBE4BO95155 1302 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 EFCAB6Q5THR3 1501 aa10.65□□□□□ -0.71
PTPRM-203ENST00000400060 IRF6O14896 467 aa10.65□□□□□ -0.71
PTPRM-203ENST00000400060 IL2RBP14784 551 aa10.65□□□□□ -0.71
PTPRM-203ENST00000400060 THOC7Q6I9Y2 204 aaKnown RBP10.65□□□□□ -0.71
PTPRM-203ENST00000400060 ZNF398Q8TD17 642 aa10.65□□□□□ -0.71
PTPRM-203ENST00000400060 CALML6Q8TD86 181 aa10.65□□□□□ -0.71
PTPRM-203ENST00000400060 FNBP1Q96RU3 617 aa10.65□□□□□ -0.71
PTPRM-203ENST00000400060 PRM3Q9NNZ6 103 aa10.65□□□□□ -0.71
PTPRM-203ENST00000400060 DMGDHQ9UI17 866 aaKnown RBP10.65□□□□□ -0.71
PTPRM-203ENST00000400060 CCDC162PA2VCL2 907 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 OPLAHO14841 1288 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PRPF3O43395 683 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 SNX3O60493 162 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 KRT6AP02538 564 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 KRT6BP04259 564 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PTDSS1P48651 473 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 GFPT1Q06210 699 aaPredicted RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 IZUMO2Q6UXV1 221 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 RSPH3Q86UC2 560 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 TSEN2Q8NCE0 465 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 DGCR14Q96DF8 476 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 TUBGCP5Q96RT8 1024 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 TIPINQ9BVW5 301 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PTTG2Q9NZH5 202 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 TRIM10Q9UDY6 481 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PALLDQ8WX93 1383 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 TTI1O43156 1089 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 ACSL3O95573 720 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 OCM2P0CE71 109 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 OCMP0CE72 109 aaPredicted RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 NCALDP61601 193 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 C1orf228Q6PIY5 440 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 OR2W6PQ8NHA6 318 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 CCT7Q99832 543 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 MID2Q9UJV3 735 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 SLC12A4Q9UP95 1085 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 APOBEC2Q9Y235 224 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 MAST3O60307 1309 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 DAB1O75553 588 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 FGAP02671 866 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PYGLP06737 847 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PRCPP42785 496 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 NPEPPSP55786 919 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 RPL26P61254 145 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PPARAQ07869 468 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 THOC5Q13769 683 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PDCD4Q53EL6 469 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 CCDC125Q86Z20 511 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 TMEM139Q8IV31 216 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 NMD3Q96D46 503 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 CFAP36Q96G28 342 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 UPF3AQ9H1J1 476 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 WNT8AQ9H1J5 351 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 SPC25Q9HBM1 224 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 MRGBPQ9NV56 204 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 RAB20Q9NX57 234 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 DMTF1Q9Y222 760 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PVALEFA0A1B0GWK0 134 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 PJA2O43164 708 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 KLHL2O95198 593 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 SERPINB1P30740 379 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 EIF2B2P49770 351 aaKnown RBP10.64□□□□□ -0.71
PTPRM-203ENST00000400060 LRRC14Q15048 493 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 CEP55Q53EZ4 464 aa10.64□□□□□ -0.71
PTPRM-203ENST00000400060 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms