RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ABCB4P21439 1286 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PAFAH1B1P43034 410 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PPP3CAQ08209 521 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 TMEM132BQ14DG7 1078 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 NIPA1Q7RTP0 329 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 SAAL1Q96ER3 474 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 ZSCAN5CA6NGD5 496 aaPredicted RBP17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 FZD9O00144 591 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PRLRP16471 622 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 STAT1P42224 750 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 FAM193AP78312 1265 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 MEI1Q5TIA1 1274 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 DCAF15Q66K64 600 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 ANO5Q75V66 913 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PALB2Q86YC2 1186 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PROCA1Q8NCQ7 364 aaPredicted RBP17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 RIN2Q8WYP3 895 aaPredicted RBP17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 MKNK1Q9BUB5 465 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 GPR88Q9GZN0 384 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 VPS18Q9P253 973 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PRDM4Q9UKN5 801 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 PCDHGC5Q9Y5F6 944 aa17.4■□□□□ 0.38
CNKSR1-202ENST00000374253 COL11A1P12107 1806 aaPredicted RBP17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 DOCK5Q9H7D0 1870 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 WDR64B1ANS9 1081 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 SOX5P35711 763 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 GABBR1Q9UBS5 961 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 DBR1Q9UK59 544 aaKnown RBP17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 USP20Q9Y2K6 914 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 UBE4BO95155 1302 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 ESYT3A0FGR9 886 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 GTPBP10A4D1E9 387 aaKnown RBP17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 KCNK3O14649 394 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 RGS20O76081 388 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 PRKCIP41743 596 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 PSMC5P62195 406 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 GHRHRQ02643 423 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 CCNI2Q6ZMN8 369 aaPredicted RBP17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 NLRX1Q86UT6 975 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 KAT5Q92993 513 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 ACCSQ96QU6 501 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 TAS2R14Q9NYV8 317 aa17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 ZNF214Q9UL59 606 aaPredicted RBP17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 BZW2Q9Y6E2 419 aaKnown RBP17.39■□□□□ 0.37
CNKSR1-202ENST00000374253 ANKRD63C9JTQ0 380 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 FOXN3O00409 490 aaPredicted RBP17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 KRT13P13646 458 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 NFIL3Q16649 462 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 ARHGEF19Q8IW93 802 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 MMGT1Q8N4V1 131 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 BSNDQ8WZ55 320 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 CCDC127Q96BQ5 260 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 POP1Q99575 1024 aaKnown RBP17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 OSGEPQ9NPF4 335 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 APEX2Q9UBZ4 518 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 FAN1Q9Y2M0 1017 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 TARSL2A2RTX5 802 aaKnown RBP17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 ZNF862O60290 1169 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 USP8P40818 1118 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 FSTL1Q12841 308 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 CFAP221Q4G0U5 840 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 SWSAP1Q6NVH7 229 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 VSIG10LQ86VR7 867 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 CBWD2Q8IUF1 395 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 OLIG1Q8TAK6 271 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 SELENOOQ9BVL4 669 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 STK33Q9BYT3 514 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 UBE2TQ9NPD8 197 aaPredicted RBP17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 ACP6Q9NPH0 428 aa17.38■□□□□ 0.37
CNKSR1-202ENST00000374253 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 A0A0U1RQG5 324 aaPredicted RBP17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 ADRB2P07550 413 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 H2AFZP0C0S5 128 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 FERP16591 822 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 VAMP7P51809 220 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 GALCP54803 685 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 C8orf74Q6P047 294 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 H2AFVQ71UI9 128 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 VPS36Q86VN1 386 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 GOLGA5Q8TBA6 731 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 SLC20A1Q8WUM9 679 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 CEP170P1Q96L14 293 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 CHORDC1Q9UHD1 332 aaPredicted RBP17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 FBXL5Q9UKA1 691 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 IGSF9BQ9UPX0 1349 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 CCND2P30279 289 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 DSG3P32926 999 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 C1orf220Q5T0J3 134 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 KRT12Q99456 494 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 TMEM206Q9H813 350 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 AS3MTQ9HBK9 375 aa17.37■□□□□ 0.37
CNKSR1-202ENST00000374253 A1CFQ9NQ94 594 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms