RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CALN1Q9BXU9 219 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
COPA-202ENST00000368069 SCINQ9Y6U3 715 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 TTI1O43156 1089 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 RFX1P22670 979 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 HDLBPQ00341 1268 aaKnown RBP12.54□□□□□ -0.4
COPA-202ENST00000368069 CCDC137Q6PK04 289 aaKnown RBP12.54□□□□□ -0.4
COPA-202ENST00000368069 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
COPA-202ENST00000368069 C11orf70Q9BRQ4 267 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 TRIM66O15016 1216 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 MCF2LO15068 1137 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 RAD51CO43502 376 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 PMS1P54277 932 aaKnown RBP12.54□□□□□ -0.4
COPA-202ENST00000368069 TBC1D1Q86TI0 1168 aaPredicted RBP12.54□□□□□ -0.4
COPA-202ENST00000368069 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
COPA-202ENST00000368069 EVI5O60447 810 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 PPP1R37O75864 691 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 ZRANB2O95218 330 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■■□□□ 12.5
COPA-202ENST00000368069 CA4P22748 312 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 BBS9Q3SYG4 887 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 KRT39Q6A163 491 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 EEPD1Q7L9B9 569 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 SLC35G2Q8TBE7 412 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 TRIM51Q9BSJ1 452 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 GOLPH3Q9H4A6 298 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 SAYSD1Q9NPB0 183 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 NYAP2Q9P242 653 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 L1RE1Q9UN81 338 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
COPA-202ENST00000368069 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
COPA-202ENST00000368069 TBX3O15119 743 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 KRT14P02533 472 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 FMO5P49326 533 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
COPA-202ENST00000368069 GEN1Q17RS7 908 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 WDR93Q6P2C0 686 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 CALR3Q96L12 384 aaKnown RBP12.53□□□□□ -0.4
COPA-202ENST00000368069 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 SEPT10Q9P0V9 454 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 PFASO15067 1338 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 EIF3HO15372 352 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■□□ 15.4
COPA-202ENST00000368069 KRT76Q01546 638 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 PPP4R1Q8TF05 950 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 VCXQ9H320 206 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 ANKZF1Q9H8Y5 726 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 ATP6V0A4Q9HBG4 840 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 MLXIPLQ9NP71 852 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 GUCY2CP25092 1073 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 SLFN12LQ6IEE8 588 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 SSX2IPQ9Y2D8 614 aa12.53□□□□□ -0.4
COPA-202ENST00000368069 FAM237AA0A1B0GTK4 181 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 WDR91A4D1P6 747 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 PLS3P13797 630 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 ANXA13P27216 316 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.4
COPA-202ENST00000368069 ZC2HC1CQ53FD0 456 aaPredicted RBP12.52□□□□□ -0.4
COPA-202ENST00000368069 LDHDQ86WU2 507 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 KCTD6Q8NC69 237 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 SH2D3AQ9BRG2 576 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 WNT8AQ9H1J5 351 aa12.52□□□□□ -0.4
COPA-202ENST00000368069 LRRIQ3A6PVS8 624 aaPredicted RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 H3BQF6 201 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 ZBTB22O15209 634 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 MT-ND3P03897 115 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 SRGAP2CP0DJJ0 459 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 PAPD7Q5XG87 772 aaKnown RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 DARS2Q6PI48 645 aaKnown RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 OR2W6PQ8NHA6 318 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 ODF2LQ9ULJ1 636 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 A6NJR5 290 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 BMP6P22004 513 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 MDH1P40925 334 aaKnown RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 CENPUQ71F23 418 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 SPATA24Q86W54 205 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 SRRM1Q8IYB3 904 aaKnown RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 C1orf54Q8WWF1 131 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 ANKS1AQ92625 1134 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 SYN2Q92777 582 aaPredicted RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 ZWILCHQ9H900 591 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 SYNJ2BP-COX16A0A087WUM0 186 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 PABPN1LA6NDY0 278 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms