RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 HEXIM2Q96MH2 286 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 MID2Q9UJV3 735 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 ARL4CP56559 192 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 BBS5Q8N3I7 341 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 FAM193BQ96PV7 902 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 WNT8AQ9H1J5 351 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 RNF146Q9NTX7 359 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 SCARA5Q6ZMJ2 495 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 RAPH1Q70E73 1250 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 PCGF5Q86SE9 256 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 NLRP7Q8WX94 980 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 MYCBPQ99417 103 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 ELAC2Q9BQ52 826 aaKnown RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 NGRNQ9NPE2 291 aaKnown RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 DAGLAQ9Y4D2 1042 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 FLT1P17948 1338 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 PIK3C2BO00750 1634 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 GUCY2CP25092 1073 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 E2F5Q15329 346 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 RAD9BQ6WBX8 426 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 TTC25Q96NG3 672 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 PITPNM3Q9BZ71 974 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 SENP2Q9HC62 589 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 DNAJC17Q9NVM6 304 aaKnown RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 CNTNAP5Q8WYK1 1306 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 MAPK13O15264 365 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 OATP04181 439 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 RXRBP28702 533 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 MAGOHP61326 146 aaKnown RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 IFRD2Q12894 506 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 DALRD3Q5D0E6 543 aaKnown RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 TRIM72Q6ZMU5 477 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 FAM213AQ9BRX8 229 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 SAYSD1Q9NPB0 183 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 TLK1Q9UKI8 766 aa18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 NOC2LQ9Y3T9 749 aaKnown RBP18.3■□□□□ 0.52
TRAPPC11-201ENST00000334690 ARHGEF37A1IGU5 675 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 VGLL3A8MV65 326 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 SLC16A3O15427 465 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 GGPS1O95749 300 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 GCKP35557 465 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 PMS2P54278 862 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 PPP2R2AP63151 447 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 NKX1-1Q15270 411 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 GDAP1Q8TB36 358 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 C11orf70Q9BRQ4 267 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 NTSR2O95665 410 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 TRIM49P0CI25 452 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 TRIM49CP0CI26 452 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 SERPINB6P35237 376 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 IREB2P48200 963 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 KPNA2P52292 529 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 TROAPQ12815 778 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 DHX34Q14147 1143 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 HAUS6Q7Z4H7 955 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 GMNCA6NCL1 334 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 ABL1P00519 1130 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 PLCD3Q8N3E9 789 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 ATP6V1G3Q96LB4 118 aa18.29■□□□□ 0.52
TRAPPC11-201ENST00000334690 ZNF211Q13398 564 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 MMEL1Q495T6 779 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 NYAP1Q6ZVC0 841 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 NUP85Q9BW27 656 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 CTIFO43310 598 aaKnown RBP18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 FBXL13Q8NEE6 735 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 FBXO41Q8TF61 875 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 PSPC1Q8WXF1 523 aaKnown RBP18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 RASA4BC9J798 803 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 STXBP3O00186 592 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 RASA4O43374 803 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 OPHN1O60890 802 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 METTL23Q86XA0 190 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 SIX6OS1Q8N1H7 587 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 HEMGNQ9BXL5 484 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 GINM1Q9NU53 330 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 AGPAT5Q9NUQ2 364 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 EMSYQ7Z589 1322 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 GOLGA8CPA6NN73 597 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 DCTN3O75935 186 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 GYPCP04921 128 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 RASA1P20936 1047 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 MUM1L1Q5H9M0 696 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 ATG16L1Q676U5 607 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 SNRNP48Q6IEG0 339 aaKnown RBP18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 C16orf86Q6ZW13 317 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 KLC2Q9H0B6 622 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 NYAP2Q9P242 653 aa18.28■□□□□ 0.52
TRAPPC11-201ENST00000334690 PLS3P13797 630 aa18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 PTPAQ15257 358 aa18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 NBPF9Q3BBW0 867 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms