RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PDLIM7Q9NR12 457 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM39AQ9NV64 488 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 HDAC6Q9UBN7 1215 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 ARID2Q68CP9 1835 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 CD4P01730 458 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 PTENP60484 403 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 CAP1Q01518 475 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM132AQ24JP5 1023 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 EDRF1Q3B7T1 1238 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 GJC2Q5T442 439 aaPredicted RBP5.69□□□□□ -1.5
LRIT3-201ENST00000327908 CXCL17Q6UXB2 119 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 MYOCDQ8IZQ8 938 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 ENGASEQ8NFI3 743 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 CEP63Q96MT8 703 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 MRPL9Q9BYD2 267 aaKnown RBP5.69□□□□□ -1.5
LRIT3-201ENST00000327908 DERAQ9Y315 318 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 RSPH10B2B2RC85 870 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 TRAK2O60296 914 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 HIP1RO75146 1068 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 STBD1O95210 358 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 KIF4AO95239 1232 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 IL18RAPO95256 599 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 TPM3P06753 285 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 RSPH10BP0C881 870 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 ZNF286BP0CG31 522 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 MCF2P10911 925 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 BEX3Q00994 111 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 PAK2Q13177 524 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 ANO5Q75V66 913 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 LRRC8DQ7L1W4 858 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 TTC39CQ8N584 583 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 MYCT1Q8N699 235 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 PHOSPHO2Q8TCD6 241 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 FAXDC2Q96IV6 333 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 SENP6Q9GZR1 1112 aaPredicted RBP5.69□□□□□ -1.5
LRIT3-201ENST00000327908 TOPORSQ9NS56 1045 aaPredicted RBP5.69□□□□□ -1.5
LRIT3-201ENST00000327908 BLOC1S4Q9NUP1 217 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 RGL1Q9NZL6 768 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 KANSL3Q9P2N6 904 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 SERTAD1Q9UHV2 236 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 MCM3APO60318 1980 aa5.69□□□□□ -1.5
LRIT3-201ENST00000327908 ACKR2O00590 384 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 SLC16A3O15427 465 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 ZNF862O60290 1169 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 TIMP1P01033 207 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 NLRP12P59046 1061 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 TRIM32Q13049 653 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 PKP1Q13835 747 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 MCM6Q14566 821 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 NBR1Q14596 966 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 BMS1Q14692 1282 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 MTFR1Q15390 333 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 HERC4Q5GLZ8 1057 aaPredicted RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 RBM43Q6ZSC3 357 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 UBE2Q1Q7Z7E8 422 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 METTL13Q8N6R0 699 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 DDX12PQ92771 950 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 BPIFA3Q9BQP9 254 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 CCDC94Q9BW85 323 aaPredicted RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 PLEKHA5Q9HAU0 1116 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 TYW1Q9NV66 732 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 K7ENM7 598 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 K7ERI5 159 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 PDXKO00764 312 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 EVI5O60447 810 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 AMHP03971 560 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 IDEP14735 1019 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 DARSP14868 501 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 RAG1P15918 1043 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 NDUFA8P51970 172 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 YARSP54577 528 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 GTF2BQ00403 316 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 COASYQ13057 564 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 GIT2Q14161 759 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 IL17AQ16552 155 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 SLC9A9Q8IVB4 645 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 SYCP3Q8IZU3 236 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 SPATA18Q8TC71 538 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 URGCPQ8TCY9 931 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 NLRP7Q8WX94 980 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 EPSTI1Q96J88 318 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 CLIC6Q96NY7 704 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 SLC9A7Q96T83 725 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 OXCT2Q9BYC2 517 aaPredicted RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 HIPK3Q9H422 1215 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 MRPL44Q9H9J2 332 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 SLC38A7Q9NVC3 462 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 KIAA1468Q9P260 1216 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 MAGEC2Q9UBF1 373 aaPredicted RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 TBX21Q9UL17 535 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 TNFSF13BQ9Y275 285 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 A0A1B0GVL5 298 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 NR1I2O75469 434 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 RPS6KA5O75582 802 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 EOMESO95936 686 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 CXCL10P02778 98 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 PRKCBP05771 671 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 EIF4BP23588 611 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 MARK3P27448 753 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 RGS19P49795 217 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms