RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 FAF2Q96CS3 445 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 TUFT1Q9NNX1 390 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 TOPORSQ9NS56 1045 aaPredicted RBP18.46■□□□□ 0.55
CDCP1-201ENST00000296129 UBE4BO95155 1302 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 GPC4O75487 556 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 PDIA5Q14554 519 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 C2orf40Q9H1Z8 148 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 SNX24Q9Y343 169 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 ADGRG1Q9Y653 693 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 ANO9A1A5B4 782 aa18.46■□□□□ 0.54
CDCP1-201ENST00000296129 EIF3BP55884 814 aaKnown RBP18.46■□□□□ 0.54
CDCP1-201ENST00000296129 RBBP5Q15291 538 aaKnown RBP18.46■□□□□ 0.54
CDCP1-201ENST00000296129 JADE1Q6IE81 842 aa18.46■□□□□ 0.54
CDCP1-201ENST00000296129 RWDD4Q6NW29 188 aaKnown RBP18.46■□□□□ 0.54
CDCP1-201ENST00000296129 SLC9A2Q9UBY0 812 aa18.46■□□□□ 0.54
CDCP1-201ENST00000296129 YWHABP31946 246 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 GLE1Q53GS7 698 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 TRIM68Q6AZZ1 485 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 EMBQ6PCB8 327 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 MICALL2Q8IY33 904 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 GPD1LQ8N335 351 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 DPF2Q92785 391 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 RBM41Q96IZ5 413 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 CALB1P05937 261 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 XPAP23025 273 aaPredicted RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 NMT1P30419 496 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 CEP55Q53EZ4 464 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 KRT39Q6A163 491 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 MRPL4Q9BYD3 311 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 PODXLO00592 558 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 TWF2Q6IBS0 349 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 INPP5FQ9Y2H2 1132 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 FNDC3AQ9Y2H6 1198 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 PREX1Q8TCU6 1659 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 EMSYQ7Z589 1322 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 TOM1L1O75674 476 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 GNA15P30679 374 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 IRX4P78413 519 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 CACYBPQ9HB71 228 aaKnown RBP18.45■□□□□ 0.54
CDCP1-201ENST00000296129 HDAC6Q9UBN7 1215 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 TLK1Q9UKI8 766 aa18.45■□□□□ 0.54
CDCP1-201ENST00000296129 WDR91A4D1P6 747 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 NDUFB10O96000 172 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 TBXAS1P24557 533 aaPredicted RBP18.44■□□□□ 0.54
CDCP1-201ENST00000296129 BARGINQ6ZT62 677 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 FBXO33Q7Z6M2 555 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 OSBPL9Q96SU4 736 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 SAYSD1Q9NPB0 183 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 PCDHA10Q9Y5I2 948 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 M0QYV0 167 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 STXBP3O00186 592 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 RASA1P20936 1047 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 ZNF211Q13398 564 aaPredicted RBP18.44■□□□□ 0.54
CDCP1-201ENST00000296129 PDXDC1Q6P996 788 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 GSPT2Q8IYD1 628 aaKnown RBP18.44■□□□□ 0.54
CDCP1-201ENST00000296129 A0A1W2PQC6 194 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 FDX1P10109 184 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 DPYDQ12882 1025 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 PDIK1LQ8N165 341 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 BEST2Q8NFU1 509 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 SPATA31A5Q5VU36 1347 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 SPATA31A7Q8IWB4 1347 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 KRT3P12035 628 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 TRIM9Q9C026 710 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 ASNSD1Q9NWL6 643 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 ANGPTL3Q9Y5C1 460 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 PNMA6AP0CW24 399 aaPredicted RBP18.44■□□□□ 0.54
CDCP1-201ENST00000296129 SEMA3FQ13275 785 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 HAUS6Q7Z4H7 955 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 AGLP35573 1532 aa18.44■□□□□ 0.54
CDCP1-201ENST00000296129 FTLP02792 175 aaPredicted RBP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 SERPINB6P35237 376 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 FMR1Q06787 632 aaKnown RBP eCLIP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 ADCY2Q08462 1091 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 C6orf118Q5T5N4 469 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 FRMD5Q7Z6J6 570 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 FIS1Q9Y3D6 152 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 ZRANB2O95218 330 aaKnown RBP eCLIP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 PCGF5Q86SE9 256 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 CCSER1Q9C0I3 900 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 RBAKQ9NYW8 714 aaPredicted RBP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 PACSIN2Q9UNF0 486 aaPredicted RBP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 SPATA31A6Q5VVP1 1343 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 HUS1O60921 280 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 CALR3Q96L12 384 aaKnown RBP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 JPH1Q9HDC5 661 aaPredicted RBP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 ZNF70Q9UC06 446 aaPredicted RBP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 HHIPL2Q6UWX4 724 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 THEM5Q8N1Q8 247 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 STRIP2Q9ULQ0 834 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 NRXN1Q9ULB1 1477 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 HMGB1P1B2RPK0 211 aaPredicted RBP18.43■□□□□ 0.54
CDCP1-201ENST00000296129 CAPN11Q9UMQ6 739 aa18.43■□□□□ 0.54
CDCP1-201ENST00000296129 PDS5AQ29RF7 1337 aaKnown RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 SSTR3P32745 418 aaPredicted RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 DBN1Q16643 649 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 FAM133BQ5BKY9 247 aaKnown RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 ELP3Q9H9T3 547 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 PDHBP11177 359 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms