RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 FAM228AQ86W67 206 aa18.48■□□□□ 0.55
SPG7-201ENST00000268704 RNF25Q96BH1 459 aaPredicted RBP18.48■□□□□ 0.55
SPG7-201ENST00000268704 TLCD1Q96CP7 247 aa18.48■□□□□ 0.55
SPG7-201ENST00000268704 SLCO1A2P46721 670 aa18.48■□□□□ 0.55
SPG7-201ENST00000268704 IFI35P80217 286 aaPredicted RBP18.48■□□□□ 0.55
SPG7-201ENST00000268704 PLCB4Q15147 1175 aa18.48■□□□□ 0.55
SPG7-201ENST00000268704 MYCT1Q8N699 235 aa18.48■□□□□ 0.55
SPG7-201ENST00000268704 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
SPG7-201ENST00000268704 XPO6Q96QU8 1125 aaKnown RBP18.48■□□□□ 0.55
SPG7-201ENST00000268704 NAP1L4Q99733 375 aaKnown RBP18.48■□□□□ 0.55
SPG7-201ENST00000268704 EIF2AK1Q9BQI3 630 aaKnown RBP18.48■□□□□ 0.55
SPG7-201ENST00000268704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.48■□□□□ 0.555e-7■■■■■ 126.4
SPG7-201ENST00000268704 DAAM1Q9Y4D1 1078 aa18.48■□□□□ 0.55
SPG7-201ENST00000268704 TULP1O00294 542 aaPredicted RBP18.47■□□□□ 0.55
SPG7-201ENST00000268704 SLC16A3O15427 465 aaKnown RBP18.47■□□□□ 0.55
SPG7-201ENST00000268704 FMO5P49326 533 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 IKQ13123 557 aaPredicted RBP18.47■□□□□ 0.55
SPG7-201ENST00000268704 BMT2Q1RMZ1 405 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 DUPD1Q68J44 220 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 RINT1Q6NUQ1 792 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 CDC42EP5Q6NZY7 148 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 CEP57Q86XR8 500 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 SLC20A1Q8WUM9 679 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 KRT35Q92764 455 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 ERP44Q9BS26 406 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 VAV3Q9UKW4 847 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 NCANO14594 1321 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 CHUKO15111 745 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 JAMLQ86YT9 394 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 AZI2Q9H6S1 392 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 INTUQ9ULD6 942 aa18.47■□□□□ 0.55
SPG7-201ENST00000268704 TMEM253P0C7T8 217 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 NPEPPSP55786 919 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 KLRC3Q07444 240 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 LLGL1Q15334 1064 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 DOK7Q18PE1 504 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 ERMARDQ5T6L9 678 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 ZDHHC24Q6UX98 284 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 TPH2Q8IWU9 490 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 HVCN1Q96D96 273 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 CHMP6Q96FZ7 201 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 RAB17Q9H0T7 212 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 ACTR5Q9H9F9 607 aaPredicted RBP18.46■□□□□ 0.55
SPG7-201ENST00000268704 MMEP08473 750 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 PDE6BP35913 854 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 PMS2P54278 862 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 DRP2Q13474 957 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 SLC29A2Q14542 456 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 PARP9Q8IXQ6 854 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 CCT6BQ92526 530 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 SUFUQ9UMX1 484 aa18.46■□□□□ 0.55
SPG7-201ENST00000268704 FAM13AO94988 1023 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 LMNB1P20700 586 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 FGFR4P22455 802 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 PSMC2P35998 433 aaKnown RBP18.46■□□□□ 0.54
SPG7-201ENST00000268704 CRY2Q49AN0 593 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 ZNF746Q6NUN9 644 aaPredicted RBP18.46■□□□□ 0.54
SPG7-201ENST00000268704 CPNE8Q86YQ8 564 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 ZDHHC14Q8IZN3 488 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 SYT11Q9BT88 431 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 STK33Q9BYT3 514 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 FAM129AQ9BZQ8 928 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 ADAM7Q9H2U9 754 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 SEMA4AQ9H3S1 761 aa18.46■□□□□ 0.54
SPG7-201ENST00000268704 RDXP35241 583 aaKnown RBP18.45■□□□□ 0.54
SPG7-201ENST00000268704 E2F5Q15329 346 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 EPS8L3Q8TE67 593 aaKnown RBP18.45■□□□□ 0.54
SPG7-201ENST00000268704 TPX2Q9ULW0 747 aaKnown RBP18.45■□□□□ 0.54
SPG7-201ENST00000268704 SCP2P22307 547 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 IFNAR2P48551 515 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 UBXN2AP68543 259 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 CCDC38Q502W7 563 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 NEK9Q8TD19 979 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 INTS2Q9H0H0 1204 aaKnown RBP18.45■□□□□ 0.54
SPG7-201ENST00000268704 RPTORQ8N122 1335 aa18.45■□□□□ 0.54
SPG7-201ENST00000268704 KIAA0391O15091 583 aaKnown RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 ATMINO43313 823 aaPredicted RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 CCDC172P0C7W6 258 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 VCAM1P19320 739 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 ANXA13P27216 316 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 AP3B2Q13367 1082 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 SNCBQ16143 134 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 Q4G0T1 1027 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 DENND2CQ68D51 928 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 PHLDB3Q6NSJ2 640 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 KIRREL3Q8IZU9 778 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 C3orf20Q8ND61 904 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 CARD9Q9H257 536 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 PABPC3Q9H361 631 aaKnown RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 TTC7AQ9ULT0 858 aaPredicted RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 GREB1LQ9C091 1923 aaPredicted RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 GTPBP10A4D1E9 387 aaKnown RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 FOXN3O00409 490 aaPredicted RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 GDF11O95390 407 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 HLA-DOAP06340 250 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 TNFAIP3P21580 790 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 ZNF76P36508 570 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 RPL21P46778 160 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms