RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ACAD11Q709F0 780 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ARMC9Q7Z3E5 817 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 KCTD17Q8N5Z5 321 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 KLC2Q9H0B6 622 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 SNX5Q9Y5X3 404 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ZNF608Q9ULD9 1512 aaPredicted RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 UBA6A0AVT1 1052 aaPredicted RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 CHGBP05060 677 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 HSPA8P11142 646 aaKnown RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ANXA13P27216 316 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 EIF3BP55884 814 aaKnown RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ARL4CP56559 192 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 RESP18Q5W5W9 173 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ZNF513Q8N8E2 541 aaPredicted RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 TTC25Q96NG3 672 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ADNPQ9H2P0 1102 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 MOCS2O96007 188 aaPredicted RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 FAM180AQ6UWF9 173 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 IL17RAQ96F46 866 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 K7ERI5 159 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 OLFML2BQ68BL8 750 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 IRX2Q9BZI1 471 aaPredicted RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 EFTUD2Q15029 972 aaKnown RBP eCLIP17.91■□□□□ 0.462e-8■■■■■ 32.1
TSPAN3-201ENST00000267970 ICA1LQ8NDH6 482 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 SH3RF3Q8TEJ3 882 aaPredicted RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 IFT43Q96FT9 208 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 MARCOQ9UEW3 520 aaPredicted RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L15C9J2P7 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L13C9JLJ4 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L11C9JVI0 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L18D6R9N7 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L22D6RA61 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L17D6RBQ6 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L19D6RCP7 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L20D6RJB6 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 MYL3P08590 195 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L24Q0WX57 530 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 DCAF15Q66K64 600 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L6PQ6QN14 398 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 NUP93Q8N1F7 819 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 ZBTB18Q99592 522 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 AP5M1Q9H0R1 490 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 CASS4Q9NQ75 786 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 TCN1P20061 433 aaPredicted RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 CARSP49589 748 aaKnown RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 KPNA2P52292 529 aaKnown RBP17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 CNKSR1Q969H4 720 aa17.91■□□□□ 0.46
TSPAN3-201ENST00000267970 PSMD2Q13200 908 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 MORF4L2Q15014 288 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 TRIM66O15016 1216 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 ARFIP2P53365 341 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 PPHLN1Q8NEY8 458 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 NAF1Q96HR8 494 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 ATP9BO43861 1147 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 RPS6P62753 249 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 V9GYQ6 96 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 KCNA4P22459 653 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 BTKQ06187 659 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 CYFIP1Q7L576 1253 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 FLCNQ8NFG4 579 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 DBR1Q9UK59 544 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 TCP11X1B4DZS4 312 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 KRT37O76014 449 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 ADORA2BP29275 332 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 AP2B1P63010 937 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 PRAMEP78395 509 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 TRIM10Q9UDY6 481 aa17.9■□□□□ 0.46
TSPAN3-201ENST00000267970 PLEKHG3A1L390 1219 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 CDK8P49336 464 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 OR2W6PQ8NHA6 318 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 ZNF564Q8TBZ8 553 aaPredicted RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 RIN2Q8WYP3 895 aaPredicted RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 POTEB3A0JP26 581 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 POTECB2RU33 542 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 GPATCH4Q5T3I0 446 aaKnown RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 IL31Q6EBC2 164 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 POTEBQ6S5H4 581 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 BTNL9Q6UXG8 535 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 PRPF3O43395 683 aaKnown RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 XPOTO43592 962 aaKnown RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 CCHCR1Q8TD31 782 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 TRAF3IP3Q9Y228 551 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 KIAA0232Q92628 1395 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 TOB2Q14106 344 aaPredicted RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 FASTKD1Q53R41 847 aaKnown RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 DHX40Q8IX18 779 aaKnown RBP17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 AMACRQ9UHK6 382 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 NUMBP49757 651 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 EMBQ6PCB8 327 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 TBC1D10CQ8IV04 446 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 EGFL8Q99944 293 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 SH2D3AQ9BRG2 576 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 WDR11Q9BZH6 1224 aa17.89■□□□□ 0.45
TSPAN3-201ENST00000267970 ZMYM3Q14202 1370 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 ZNF233A6NK53 670 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 PSAPP07602 524 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms