RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ODF2LQ9ULJ1 636 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 RBBP6Q7Z6E9 1792 aaKnown RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 DDX3YO15523 660 aaKnown RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 FGGP02679 453 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 CCDC172P0C7W6 258 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 ZNF844Q08AG5 666 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 KCTD19Q17RG1 926 aaPredicted RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 CEP55Q53EZ4 464 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 DIS3Q9Y2L1 958 aaKnown RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 ZNF646O15015 1829 aaPredicted RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 IGSF9BQ9UPX0 1349 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 MMP10P09238 476 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 TNFAIP3P21580 790 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 MTMR3Q13615 1198 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 PLS1Q14651 629 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 FMNL3Q8IVF7 1028 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 ARFGAP2Q8N6H7 521 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
DDX56-201ENST00000258772 NR2E1Q9Y466 385 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 ARP10275 920 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 HPDP32754 393 aaPredicted RBP16.53■□□□□ 0.24
DDX56-201ENST00000258772 LIG3P49916 1009 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 DCAF12L1Q5VU92 463 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 NAA35Q5VZE5 725 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 PHLDB3Q6NSJ2 640 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 CCDC174Q6PII3 467 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 ACER1Q8TDN7 264 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 UBLCP1Q8WVY7 318 aaPredicted RBP16.53■□□□□ 0.24
DDX56-201ENST00000258772 ARHGEF26Q96DR7 871 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 UNC45AQ9H3U1 944 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 EFCC1Q9HA90 598 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 ARHGEF10LQ9HCE6 1279 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 FAM114A2Q9NRY5 505 aa16.53■□□□□ 0.24
DDX56-201ENST00000258772 UTP11Q9Y3A2 253 aaKnown RBP16.53■□□□□ 0.24
DDX56-201ENST00000258772 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.24
DDX56-201ENST00000258772 MYO1FO00160 1098 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 EXOC3O60645 756 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 ERLIN2O94905 339 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.24
DDX56-201ENST00000258772 MYL7Q01449 175 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 BFSP1Q12934 665 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 ARHGAP44Q17R89 818 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 RUFY4Q6ZNE9 571 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 TMC3Q7Z5M5 1100 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.24
DDX56-201ENST00000258772 SLC9A9Q8IVB4 645 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 RDH13Q8NBN7 331 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 LMO3Q8TAP4 145 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 ZNF577Q9BSK1 485 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 STRA6Q9BX79 667 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDX56-201ENST00000258772 TAS2R14Q9NYV8 317 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 DAAM1Q9Y4D1 1078 aa16.52■□□□□ 0.24
DDX56-201ENST00000258772 ANKRD62A6NC57 917 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 VGLL3A8MV65 326 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 FOXN3O00409 490 aaPredicted RBP16.52■□□□□ 0.23
DDX56-201ENST00000258772 GUCY2CP25092 1073 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 SEC24CP53992 1094 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 BIRC3Q13489 604 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 B3GNT9Q6UX72 402 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 PALB2Q86YC2 1186 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 CCT8L2Q96SF2 557 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 THAP2Q9H0W7 228 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 CARD9Q9H257 536 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 DPH5Q9H2P9 285 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 TMX2Q9Y320 296 aa16.52■□□□□ 0.23
DDX56-201ENST00000258772 ATXN2Q99700 1313 aaKnown RBP16.52■□□□□ 0.23
DDX56-201ENST00000258772 INPP5BP32019 993 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 KIF22Q14807 665 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 NLRP14Q86W24 1093 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 BANK1Q8NDB2 785 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 MYCBPAPQ8TBZ2 947 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 ZNF473Q8WTR7 871 aaKnown RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 HOOK2Q96ED9 719 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 LXNQ9BS40 222 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 PAGR1Q9BTK6 254 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 EHMT1Q9H9B1 1298 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 HERC5Q9UII4 1024 aaKnown RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 HIP1RO75146 1068 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 PTENP60484 403 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 DHX9Q08211 1270 aaKnown RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 DAW1Q8N136 415 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 TRIM51Q9BSJ1 452 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 COG5Q9UP83 839 aa16.51■□□□□ 0.23
DDX56-201ENST00000258772 MRPL11Q9Y3B7 192 aaKnown RBP16.51■□□□□ 0.23
DDX56-201ENST00000258772 LOXHD1Q8IVV2 1947 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 ARHGEF35A5YM69 484 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 RFX1P22670 979 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 HMGB2P26583 209 aaKnown RBP16.5■□□□□ 0.23
DDX56-201ENST00000258772 MAPK7Q13164 816 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 PPP2R5EQ16537 467 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms