RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 VPS37DQ86XT2 251 aa2.37□□□□□ -2.03
KTN1-224ENST00000556631 PDILTQ8N807 584 aa2.37□□□□□ -2.03
KTN1-224ENST00000556631 BRPF1P55201 1214 aaPredicted RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 NAP1L1P55209 391 aaKnown RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 ZRSR2Q15696 482 aaKnown RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 RBM26Q5T8P6 1007 aaKnown RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 RNF25Q96BH1 459 aaPredicted RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 ZNF692Q9BU19 519 aaPredicted RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 ISY1Q9ULR0 285 aaKnown RBP2.37□□□□□ -2.03
KTN1-224ENST00000556631 MPHOSPH10O00566 681 aaKnown RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 KIAA2012Q0VF49 1180 aa2.36□□□□□ -2.03
KTN1-224ENST00000556631 RGL2O15211 777 aa2.36□□□□□ -2.03
KTN1-224ENST00000556631 KDM4AO75164 1064 aa2.36□□□□□ -2.03
KTN1-224ENST00000556631 FOSBP53539 338 aa2.36□□□□□ -2.03
KTN1-224ENST00000556631 MORC4Q8TE76 937 aa2.36□□□□□ -2.03
KTN1-224ENST00000556631 VGFO15240 615 aaPredicted RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 CAPN15O75808 1086 aa2.36□□□□□ -2.03
KTN1-224ENST00000556631 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 DHX37Q8IY37 1157 aaKnown RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 ZCRB1Q8TBF4 217 aaKnown RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 FYB1O15117 783 aa2.36□□□□□ -2.03
KTN1-224ENST00000556631 CT47A1Q5JQC4 288 aaPredicted RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 SP7Q8TDD2 431 aaPredicted RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 SPINK5Q9NQ38 1064 aaPredicted RBP2.36□□□□□ -2.03
KTN1-224ENST00000556631 TSC1Q92574 1164 aa2.35□□□□□ -2.03
KTN1-224ENST00000556631 ZNF219Q9P2Y4 722 aaPredicted RBP2.35□□□□□ -2.03
KTN1-224ENST00000556631 PPM1FP49593 454 aaPredicted RBP2.35□□□□□ -2.03
KTN1-224ENST00000556631 CACNB1Q02641 598 aaPredicted RBP2.35□□□□□ -2.03
KTN1-224ENST00000556631 FAM50AQ14320 339 aaKnown RBP2.35□□□□□ -2.03
KTN1-224ENST00000556631 DRC1Q96MC2 740 aa2.35□□□□□ -2.03
KTN1-224ENST00000556631 SSR1P43307 286 aaKnown RBP2.35□□□□□ -2.03
KTN1-224ENST00000556631 CASC1Q6TDU7 716 aa2.35□□□□□ -2.03
KTN1-224ENST00000556631 PHF14O94880 888 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 ABL2P42684 1182 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 ENOX2Q16206 610 aaKnown RBP2.34□□□□□ -2.03
KTN1-224ENST00000556631 ERICH6BQ5W0A0 696 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 PMFBP1Q8TBY8 1022 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 VTI1AQ96AJ9 217 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 LOC100996750A0A140TA64 210 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 RIOK3O14730 519 aaKnown RBP2.34□□□□□ -2.03
KTN1-224ENST00000556631 MCCP23508 829 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 PPP1R15AO75807 674 aaPredicted RBP2.34□□□□□ -2.03
KTN1-224ENST00000556631 ZRANB2O95218 330 aaKnown RBP eCLIP2.34□□□□□ -2.03
KTN1-224ENST00000556631 NKX1-1Q15270 411 aaPredicted RBP2.34□□□□□ -2.03
KTN1-224ENST00000556631 FAM9BQ8IZU0 186 aa2.34□□□□□ -2.03
KTN1-224ENST00000556631 FAM177A1Q8N128 213 aaPredicted RBP2.34□□□□□ -2.03
KTN1-224ENST00000556631 WDHD1O75717 1129 aaPredicted RBP2.34□□□□□ -2.04
KTN1-224ENST00000556631 PAK3O75914 559 aaPredicted RBP2.34□□□□□ -2.04
KTN1-224ENST00000556631 CT47B1P0C2W7 299 aaPredicted RBP2.34□□□□□ -2.04
KTN1-224ENST00000556631 XPCQ01831 940 aaPredicted RBP2.34□□□□□ -2.04
KTN1-224ENST00000556631 FAM160A1Q05DH4 1040 aa2.34□□□□□ -2.04
KTN1-224ENST00000556631 NUTM2BA6NNL0 878 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 NUTM2EB1AL46 878 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 TRIM6-TRIM34B2RNG4 842 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 SH3BGRP55822 239 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 PPP2R5AQ15172 486 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 NUTM2DQ5VT03 806 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 NUTM2AQ8IVF1 878 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 ZHX3Q9H4I2 956 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 E2F4Q16254 413 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 RRP12Q5JTH9 1297 aaKnown RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 HS6ST3Q8IZP7 471 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 TRERF1Q96PN7 1200 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 BCL11BQ9C0K0 894 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 ANO8Q9HCE9 1232 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 SP100P23497 879 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 SLC4A3P48751 1232 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 CHMP4BP1P59074 171 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 RBAK-RBAKDNI3L0D1 243 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 CNGA1P29973 690 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 LMOD3Q0VAK6 560 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 HSP90AA2PQ14568 343 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 BCL2L13Q9BXK5 485 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 LETM1O95202 739 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 HDAC1Q13547 482 aaPredicted RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 PIK3R5Q8WYR1 880 aa2.33□□□□□ -2.04
KTN1-224ENST00000556631 SRRTQ9BXP5 876 aaKnown RBP2.33□□□□□ -2.04
KTN1-224ENST00000556631 SMARCA5O60264 1052 aaPredicted RBP2.32□□□□□ -2.04
KTN1-224ENST00000556631 PROSER2Q86WR7 435 aaPredicted RBP2.32□□□□□ -2.04
KTN1-224ENST00000556631 DZIP1Q86YF9 867 aaKnown RBP2.32□□□□□ -2.04
KTN1-224ENST00000556631 ZC3H15Q8WU90 426 aaKnown RBP2.32□□□□□ -2.04
KTN1-224ENST00000556631 TANGO6Q9C0B7 1094 aa2.32□□□□□ -2.04
KTN1-224ENST00000556631 METTL14Q9HCE5 456 aaKnown RBP2.32□□□□□ -2.04
KTN1-224ENST00000556631 PAIP2Q9BPZ3 127 aaKnown RBP2.32□□□□□ -2.04
KTN1-224ENST00000556631 WDR97A6NE52 1622 aa2.32□□□□□ -2.04
KTN1-224ENST00000556631 NACADO15069 1562 aa2.32□□□□□ -2.04
KTN1-224ENST00000556631 LMNB1P20700 586 aa2.32□□□□□ -2.04
KTN1-224ENST00000556631 NEUROD1Q13562 356 aa2.32□□□□□ -2.04
KTN1-224ENST00000556631 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.32□□□□□ -2.04
KTN1-224ENST00000556631 KDM4CQ9H3R0 1056 aa2.32□□□□□ -2.04
KTN1-224ENST00000556631 CCSER2Q9H7U1 834 aa2.32□□□□□ -2.04
KTN1-224ENST00000556631 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.32□□□□□ -2.04
KTN1-224ENST00000556631 GTF2F1P35269 517 aaKnown RBP eCLIP2.32□□□□□ -2.04
KTN1-224ENST00000556631 ATP2B1P20020 1258 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 KCNA1Q09470 495 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 BTN2A1Q7KYR7 527 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 LCA5Q86VQ0 697 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 TRAIPQ9BWF2 469 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 PSME1Q06323 249 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 892.6 ms