RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 ZC3H4Q9UPT8 1303 aaKnown RBP8.71□□□□□ -1.02
KPNA1-208ENST00000485027 TBC1D12O60347 775 aa8.7□□□□□ -1.02
KPNA1-208ENST00000485027 SH3D19Q5HYK7 790 aa8.7□□□□□ -1.02
KPNA1-208ENST00000485027 PBXIP1Q96AQ6 731 aa8.7□□□□□ -1.02
KPNA1-208ENST00000485027 ANKRD62A6NC57 917 aa8.7□□□□□ -1.02
KPNA1-208ENST00000485027 POM121CA8CG34 1229 aa8.7□□□□□ -1.02
KPNA1-208ENST00000485027 NOL8Q76FK4 1167 aaKnown RBP8.7□□□□□ -1.02
KPNA1-208ENST00000485027 SNRKQ9NRH2 765 aa8.7□□□□□ -1.02
KPNA1-208ENST00000485027 MFSD10Q14728 455 aa8.69□□□□□ -1.02
KPNA1-208ENST00000485027 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
KPNA1-208ENST00000485027 GLMNQ92990 594 aa8.69□□□□□ -1.02
KPNA1-208ENST00000485027 BCL11AQ9H165 835 aa8.69□□□□□ -1.02
KPNA1-208ENST00000485027 SPDYE2BA6NHP3 402 aa8.68□□□□□ -1.02
KPNA1-208ENST00000485027 SPDYE5A6NIY4 337 aa8.68□□□□□ -1.02
KPNA1-208ENST00000485027 SPDYE6P0CI01 402 aa8.68□□□□□ -1.02
KPNA1-208ENST00000485027 TCF3P15923 654 aa8.68□□□□□ -1.02
KPNA1-208ENST00000485027 NCLP19338 710 aaKnown RBP8.68□□□□□ -1.02
KPNA1-208ENST00000485027 CAMK2BQ13554 666 aa8.68□□□□□ -1.02
KPNA1-208ENST00000485027 SPDYE2Q495Y8 402 aa8.68□□□□□ -1.02
KPNA1-208ENST00000485027 PROCA1Q8NCQ7 364 aaPredicted RBP8.68□□□□□ -1.02
KPNA1-208ENST00000485027 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
KPNA1-208ENST00000485027 ZBTB12Q9Y330 459 aaPredicted RBP8.68□□□□□ -1.02
KPNA1-208ENST00000485027 MARCH6O60337 910 aa8.68□□□□□ -1.02
KPNA1-208ENST00000485027 CSB-PGBD3P0DP91 1061 aa8.67□□□□□ -1.02
KPNA1-208ENST00000485027 RFX1P22670 979 aa8.67□□□□□ -1.02
KPNA1-208ENST00000485027 ZNF662Q6ZS27 426 aa8.67□□□□□ -1.02
KPNA1-208ENST00000485027 RASEFQ8IZ41 740 aa8.67□□□□□ -1.02
KPNA1-208ENST00000485027 HIRIP3Q9BW71 556 aaPredicted RBP8.67□□□□□ -1.02
KPNA1-208ENST00000485027 LOC102724159A0A0B4J2E5 919 aa8.66□□□□□ -1.02
KPNA1-208ENST00000485027 PWP2Q15269 919 aaKnown RBP8.66□□□□□ -1.02
KPNA1-208ENST00000485027 OSCARQ8IYS5 282 aa8.66□□□□□ -1.02
KPNA1-208ENST00000485027 PPP1R1BQ9UD71 204 aaPredicted RBP8.66□□□□□ -1.02
KPNA1-208ENST00000485027 BAZ1AQ9NRL2 1556 aaPredicted RBP8.66□□□□□ -1.02
KPNA1-208ENST00000485027 SRPK2P78362 688 aaKnown RBP8.66□□□□□ -1.02
KPNA1-208ENST00000485027 GIMAP6Q6P9H5 292 aa8.66□□□□□ -1.02
KPNA1-208ENST00000485027 ZNF16P17020 682 aaPredicted RBP8.65□□□□□ -1.02
KPNA1-208ENST00000485027 FECHP22830 423 aa8.65□□□□□ -1.02
KPNA1-208ENST00000485027 C8orf37Q96NL8 207 aa8.65□□□□□ -1.02
KPNA1-208ENST00000485027 RIPOR2Q9Y4F9 1068 aa8.65□□□□□ -1.02
KPNA1-208ENST00000485027 GDPD2Q9HCC8 539 aa8.64□□□□□ -1.03
KPNA1-208ENST00000485027 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
KPNA1-208ENST00000485027 NOM1Q5C9Z4 860 aaKnown RBP8.64□□□□□ -1.03
KPNA1-208ENST00000485027 DNAJC14Q6Y2X3 702 aaPredicted RBP8.64□□□□□ -1.03
KPNA1-208ENST00000485027 DDX27Q96GQ7 796 aaKnown RBP8.64□□□□□ -1.03
KPNA1-208ENST00000485027 TSR1Q2NL82 804 aaKnown RBP8.62□□□□□ -1.03
KPNA1-208ENST00000485027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.031e-6■■■■□ 20.9
KPNA1-208ENST00000485027 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
KPNA1-208ENST00000485027 CFAP70Q5T0N1 1121 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 VRTNQ9H8Y1 702 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 SMARCA2P51531 1590 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 MROH2BQ7Z745 1585 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 ATAD2BQ9ULI0 1458 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
KPNA1-208ENST00000485027 UBXN4Q92575 508 aa8.61□□□□□ -1.03
KPNA1-208ENST00000485027 TMEM88BA6NKF7 163 aa8.6□□□□□ -1.03
KPNA1-208ENST00000485027 PDE4AP27815 886 aa8.6□□□□□ -1.03
KPNA1-208ENST00000485027 NCAPD3P42695 1498 aa8.59□□□□□ -1.03
KPNA1-208ENST00000485027 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
KPNA1-208ENST00000485027 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
KPNA1-208ENST00000485027 PPME1Q9Y570 386 aa8.59□□□□□ -1.03
KPNA1-208ENST00000485027 MICAL1Q8TDZ2 1067 aa8.59□□□□□ -1.03
KPNA1-208ENST00000485027 GNEQ9Y223 722 aaKnown RBP8.59□□□□□ -1.03
KPNA1-208ENST00000485027 CCDC136Q96JN2 1154 aa8.58□□□□□ -1.04
KPNA1-208ENST00000485027 POLR3EQ9NVU0 708 aa8.58□□□□□ -1.04
KPNA1-208ENST00000485027 ABCB7O75027 752 aa8.57□□□□□ -1.04
KPNA1-208ENST00000485027 ZNF467Q7Z7K2 595 aaPredicted RBP8.57□□□□□ -1.04
KPNA1-208ENST00000485027 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
KPNA1-208ENST00000485027 SLC52A1Q9NWF4 448 aa8.57□□□□□ -1.04
KPNA1-208ENST00000485027 ATP1B4Q9UN42 357 aaPredicted RBP8.57□□□□□ -1.04
KPNA1-208ENST00000485027 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
KPNA1-208ENST00000485027 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
KPNA1-208ENST00000485027 SUGT1Q9Y2Z0 365 aa8.57□□□□□ -1.04
KPNA1-208ENST00000485027 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
KPNA1-208ENST00000485027 MNX1P50219 401 aaPredicted RBP8.56□□□□□ -1.04
KPNA1-208ENST00000485027 WIZO95785 1651 aa8.56□□□□□ -1.04
KPNA1-208ENST00000485027 NUTM2FA1L443 756 aa8.55□□□□□ -1.04
KPNA1-208ENST00000485027 GNPATO15228 680 aa8.55□□□□□ -1.04
KPNA1-208ENST00000485027 ABL2P42684 1182 aa8.55□□□□□ -1.04
KPNA1-208ENST00000485027 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
KPNA1-208ENST00000485027 EXOC8Q8IYI6 725 aa8.55□□□□□ -1.04
KPNA1-208ENST00000485027 MTMR14Q8NCE2 650 aa8.55□□□□□ -1.04
KPNA1-208ENST00000485027 BCL2L13Q9BXK5 485 aa8.55□□□□□ -1.04
KPNA1-208ENST00000485027 DPYSL4O14531 572 aa8.54□□□□□ -1.04
KPNA1-208ENST00000485027 GIPC2Q8TF65 315 aa8.54□□□□□ -1.04
KPNA1-208ENST00000485027 FOSBP53539 338 aa8.54□□□□□ -1.04
KPNA1-208ENST00000485027 TEX2Q8IWB9 1127 aa8.54□□□□□ -1.04
KPNA1-208ENST00000485027 BAZ1BQ9UIG0 1483 aaKnown RBP8.53□□□□□ -1.04
KPNA1-208ENST00000485027 FGD1P98174 961 aa8.53□□□□□ -1.04
KPNA1-208ENST00000485027 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
KPNA1-208ENST00000485027 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
KPNA1-208ENST00000485027 RFC5P40937 340 aa8.52□□□□□ -1.04
KPNA1-208ENST00000485027 PDAP1Q13442 181 aaKnown RBP8.52□□□□□ -1.04
KPNA1-208ENST00000485027 DPH6Q7L8W6 267 aa8.52□□□□□ -1.04
KPNA1-208ENST00000485027 BANK1Q8NDB2 785 aa8.52□□□□□ -1.04
KPNA1-208ENST00000485027 TPD52L2O43399 206 aaKnown RBP8.52□□□□□ -1.05
KPNA1-208ENST00000485027 PDIA6Q15084 440 aa8.52□□□□□ -1.05
KPNA1-208ENST00000485027 CAPN15O75808 1086 aa8.51□□□□□ -1.05
KPNA1-208ENST00000485027 TBC1D2BQ9UPU7 963 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 412.5 ms