RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 GTF2F1P35269 517 aaKnown RBP eCLIP22.58■■□□□ 1.211e-6■■■■□ 26
CLN6-222ENST00000637667 AK2P54819 239 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 DRP2Q13474 957 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 NEK8Q86SG6 692 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 NLRP7Q8WX94 980 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 CEP89Q96ST8 783 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 IGFLR1Q9H665 355 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 GJB4Q9NTQ9 266 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 ORC3Q9UBD5 711 aaPredicted RBP22.58■■□□□ 1.21
CLN6-222ENST00000637667 WDR81Q562E7 1941 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 GCFC2P16383 781 aaKnown RBP22.57■■□□□ 1.2
CLN6-222ENST00000637667 ZSCAN20P17040 1043 aaPredicted RBP22.57■■□□□ 1.2
CLN6-222ENST00000637667 SSTR3P32745 418 aaPredicted RBP22.57■■□□□ 1.2
CLN6-222ENST00000637667 IRS1P35568 1242 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 PSMC5P62195 406 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 DLX2Q07687 328 aaPredicted RBP22.57■■□□□ 1.2
CLN6-222ENST00000637667 PPP4R3AQ6IN85 833 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 OXER1Q8TDS5 423 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 FAM20AQ96MK3 541 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 TMEM117Q9H0C3 514 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 KCNMB3Q9NPA1 279 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 TYW1Q9NV66 732 aaKnown RBP22.57■■□□□ 1.2
CLN6-222ENST00000637667 HCSTQ9UBK5 93 aa22.57■■□□□ 1.2
CLN6-222ENST00000637667 IGKV6-21A0A0C4DH24 114 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 DDX11L8A8MPP1 907 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 EML1O00423 815 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 HOXA2O43364 376 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 UBE3AQ05086 875 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 PPP2R5CQ13362 524 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 PIK3AP1Q6ZUJ8 805 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 WASF1Q92558 559 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 SH2D3AQ9BRG2 576 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 RNF19AQ9NV58 838 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 VAV3Q9UKW4 847 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 ATG2AQ2TAZ0 1938 aa22.56■■□□□ 1.2
CLN6-222ENST00000637667 LINC01565O15544 149 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 TBX10O75333 385 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 FGFR4P22455 802 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 DNM2P50570 870 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 CDC42EP1Q00587 391 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 ADAM15Q13444 863 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 CLUL1Q15846 466 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 CSPP1Q1MSJ5 1256 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 ADGRD2Q7Z7M1 963 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 ECHDC2Q86YB7 292 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 COLGALT1Q8NBJ5 622 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 GCOM2Q9BZD3 368 aaPredicted RBP22.55■■□□□ 1.2
CLN6-222ENST00000637667 CWH43Q9H720 699 aa22.55■■□□□ 1.2
CLN6-222ENST00000637667 KIAA1671Q9BY89 1806 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 CCNT1O60563 726 aaKnown RBP22.54■■□□□ 1.2
CLN6-222ENST00000637667 FGF18O76093 207 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 LAG3P18627 525 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 ANO5Q75V66 913 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 THNSL1Q8IYQ7 743 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 EFHBQ8N7U6 833 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 NECAB1Q8N987 351 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 CASD1Q96PB1 797 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 NAP1L4Q99733 375 aaKnown RBP22.54■■□□□ 1.2
CLN6-222ENST00000637667 SUCLA2Q9P2R7 463 aaPredicted RBP22.54■■□□□ 1.2
CLN6-222ENST00000637667 PRKAG3Q9UGI9 489 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 RAPGEFL1Q9UHV5 662 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 PCDHGC5Q9Y5F6 944 aa22.54■■□□□ 1.2
CLN6-222ENST00000637667 PI4K2BG5E9Z4 385 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 TBX3O15119 743 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 MAFO75444 373 aaPredicted RBP22.53■■□□□ 1.2
CLN6-222ENST00000637667 CSDE1O75534 798 aaKnown RBP22.53■■□□□ 1.2
CLN6-222ENST00000637667 QARSP47897 775 aaKnown RBP22.53■■□□□ 1.2
CLN6-222ENST00000637667 NRIP1P48552 1158 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 NDUFV1P49821 464 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 ZP2Q05996 745 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 EARS2Q5JPH6 523 aaKnown RBP22.53■■□□□ 1.2
CLN6-222ENST00000637667 TMEM31Q5JXX7 168 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 PLA2G4FQ68DD2 849 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 ABI1Q8IZP0 508 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 RNF169Q8NCN4 708 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 HAS1Q92839 578 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 GTF3C6Q969F1 213 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 JPH2Q9BR39 696 aaPredicted RBP22.53■■□□□ 1.2
CLN6-222ENST00000637667 TLR9Q9NR96 1032 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 DACT1Q9NYF0 836 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 CD207Q9UJ71 328 aa22.53■■□□□ 1.2
CLN6-222ENST00000637667 FNDC1Q4ZHG4 1894 aaPredicted RBP22.53■■□□□ 1.2
CLN6-222ENST00000637667 A0A087WZ62 844 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 A0A0U1RQF3 1178 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 MBTPS2O43462 519 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 DKC1O60832 514 aaKnown RBP eCLIP22.52■■□□□ 1.2
CLN6-222ENST00000637667 LARGE1O95461 756 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 FDPSP14324 419 aaKnown RBP22.52■■□□□ 1.2
CLN6-222ENST00000637667 SMAD4Q13485 552 aaKnown RBP22.52■■□□□ 1.2
CLN6-222ENST00000637667 SMAD2Q15796 467 aaKnown RBP22.52■■□□□ 1.2
CLN6-222ENST00000637667 ME3Q16798 604 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 LRRC55Q6ZSA7 311 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 RBM23Q86U06 439 aaKnown RBP22.52■■□□□ 1.2
CLN6-222ENST00000637667 ZNF410Q86VK4 478 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 ADHFE1Q8IWW8 467 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 LRRC43Q8N309 656 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 MICAL1Q8TDZ2 1067 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 FDXACB1Q9BRP7 624 aaPredicted RBP22.52■■□□□ 1.2
CLN6-222ENST00000637667 LRFN3Q9BTN0 628 aa22.52■■□□□ 1.2
CLN6-222ENST00000637667 CYP26B1Q9NR63 512 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms