RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 A0A1B0GW55 424 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 DUX4L2P0CJ85 424 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 DUX4L3P0CJ86 424 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 DUX4L4P0CJ87 422 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 DUX4L5P0CJ88 424 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 DUX4L6P0CJ89 424 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 DUX4L7P0CJ90 424 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 ME3Q16798 604 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 PHKG1Q16816 387 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 EPM2AIP1Q7L775 607 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 TRIM69Q86WT6 500 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 ARHGEF3Q9NR81 526 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 DUX4Q9UBX2 424 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 LZTS1Q9Y250 596 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 CLIC4Q9Y696 253 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 SRGAP2O75044 1071 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 BTNL9Q6UXG8 535 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 CNOT10Q9H9A5 744 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 TNNQ9UQP3 1299 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 MEFVO15553 781 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 GUCY2CP25092 1073 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 COA7Q96BR5 231 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 H0Y626 953 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 TRIM16O95361 564 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 APBA1Q02410 837 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 SPATA1Q5VX52 437 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 CENPTQ96BT3 561 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 FAM32AQ9Y421 112 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 LRRC8BQ6P9F7 803 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 EPHB4P54760 987 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 FASTKD1Q53R41 847 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 CYP4F11Q9HBI6 524 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 EML4Q9HC35 981 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 NESP48681 1621 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 PBKQ96KB5 322 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 LBHD1Q9BQE6 289 aaPredicted RBP18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 PITPNM3Q9BZ71 974 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 DTNAQ9Y4J8 743 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 CYTH3O43739 400 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 CSE1LP55060 971 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 SPARCL1Q14515 664 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 DAB1O75553 588 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 SERPINB10P48595 397 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 RCSD1Q6JBY9 416 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 HDDC2Q7Z4H3 204 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 HES6Q96HZ4 224 aa18.65■□□□□ 0.58
CACNA1A-225ENST00000636389 RBL2Q08999 1139 aa18.64■□□□□ 0.58
CACNA1A-225ENST00000636389 C10orf53Q8N6V4 93 aa18.64■□□□□ 0.58
CACNA1A-225ENST00000636389 OTUD7AQ8TE49 926 aaPredicted RBP18.64■□□□□ 0.58
CACNA1A-225ENST00000636389 MYO1GB0I1T2 1018 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 VAMP4O75379 141 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 CPB1P15086 417 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 HOXA13P31271 388 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 ZNF699Q32M78 642 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 ADCK1Q86TW2 530 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 ZNF555Q8NEP9 628 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 SIK2Q9H0K1 926 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 MAD2L2Q9UI95 211 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 PLD3Q8IV08 490 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 ACAP3Q96P50 834 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 WDR11Q9BZH6 1224 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 TJP2Q9UDY2 1190 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 NOVA2Q9UNW9 492 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 RASSF10A6NK89 507 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 MOCS2O96007 188 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 ALDH1A1P00352 501 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 AP2B1P63010 937 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 PTPN21Q16825 1174 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 NUGGCQ68CJ6 796 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 C2orf69Q8N8R5 385 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 AGBL1Q96MI9 1066 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 FOPNLQ96NB1 174 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 UNC45AQ9H3U1 944 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 BCL2L12Q9HB09 334 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 FAM161BQ96MY7 647 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 ADD1P35611 737 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 PEX3P56589 373 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 NUP93Q8N1F7 819 aa18.64■□□□□ 0.57
CACNA1A-225ENST00000636389 TLR2O60603 784 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 GRIK1P39086 918 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 ACTR5Q9H9F9 607 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 SYDE2Q5VT97 1194 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 ZNF804BA4D1E1 1349 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 ALFQ53S48 1182 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 DIS3LQ8TF46 1054 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 PLEKHA8Q96JA3 519 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 GTF2A1LQ9UNN4 478 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 EPB42P16452 691 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 FBXO18Q8NFZ0 1043 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 EDC3Q96F86 508 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 USP28Q96RU2 1077 aa18.63■□□□□ 0.57
CACNA1A-225ENST00000636389 PCDHA4Q9UN74 947 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms