RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CPA4Q9UI42 421 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 CAPN11Q9UMQ6 739 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 LUC7L2Q9Y383 392 aaKnown RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 RNF225M0QZC1 329 aaPredicted RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 IGF2BP3O00425 579 aaKnown RBP eCLIP23.56■■□□□ 1.36
SPAST-204ENST00000621856 E4F1Q66K89 784 aaPredicted RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 ZNF467Q7Z7K2 595 aaPredicted RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 AFAP1L1Q8TED9 768 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 SPATA33Q96N06 139 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 GPR20Q99678 358 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 ST6GALNAC4Q9H4F1 302 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 METTL14Q9HCE5 456 aaKnown RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 USP27XA6NNY8 438 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 AKAP3O75969 853 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 SOX10P56693 466 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 GRB14Q14449 540 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 TAF1CQ15572 869 aaPredicted RBP23.55■■□□□ 1.36
SPAST-204ENST00000621856 COPS5Q92905 334 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 MMRN2Q9H8L6 949 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 C17orf75Q9HAS0 396 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 VTA1Q9NP79 307 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 KMT5AQ9NQR1 393 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 XPNPEP1Q9NQW7 623 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 PDLIM7Q9NR12 457 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 KCND1Q9NSA2 647 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 SIK3Q9Y2K2 1263 aa23.55■■□□□ 1.36
SPAST-204ENST00000621856 DIS3Q9Y2L1 958 aaKnown RBP23.55■■□□□ 1.36
SPAST-204ENST00000621856 NPTX2P47972 431 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 CASP4P49662 377 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 CYP2J2P51589 502 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 GTF2BQ00403 316 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 PPP2R3AQ06190 1150 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 EMC2Q15006 297 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 GLG1Q92896 1179 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 IQCDQ96DY2 449 aa23.54■■□□□ 1.36
SPAST-204ENST00000621856 NIFKQ9BYG3 293 aaKnown RBP23.54■■□□□ 1.36
SPAST-204ENST00000621856 POLR3FQ9H1D9 316 aaPredicted RBP23.54■■□□□ 1.36
SPAST-204ENST00000621856 ZCCHC17Q9NP64 241 aaKnown RBP23.54■■□□□ 1.36
SPAST-204ENST00000621856 PASKQ96RG2 1323 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 RASSF10A6NK89 507 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 CCP110O43303 1012 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 SLC10A3P09131 477 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 PSMC2P35998 433 aaKnown RBP23.53■■□□□ 1.36
SPAST-204ENST00000621856 TSR1Q2NL82 804 aaKnown RBP23.53■■□□□ 1.36
SPAST-204ENST00000621856 HSDL1Q3SXM5 330 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 FAM186BQ8IYM0 893 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 SPIRE2Q8WWL2 714 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 BSNDQ8WZ55 320 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 FAM167AQ96KS9 214 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 IFT74Q96LB3 600 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.53■■□□□ 1.36
SPAST-204ENST00000621856 DCAF17Q5H9S7 520 aaPredicted RBP23.53■■□□□ 1.36
SPAST-204ENST00000621856 FIGNQ5HY92 759 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 OR8K1Q8NGG5 319 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 HVCN1Q96D96 273 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 C16orf45Q96MC5 204 aaPredicted RBP23.53■■□□□ 1.36
SPAST-204ENST00000621856 TTYH3Q9C0H2 523 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 EXOC7Q9UPT5 735 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 FRMD4BQ9Y2L6 1034 aa23.53■■□□□ 1.36
SPAST-204ENST00000621856 ADGRA2Q96PE1 1338 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 SLC15A5A6NIM6 579 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 LGR5O75473 907 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 XRCC5P13010 732 aaKnown RBP23.52■■□□□ 1.36
SPAST-204ENST00000621856 RTP1P59025 263 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 KCNH2Q12809 1159 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 CCDC155Q8N6L0 562 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 ZNF397Q8NF99 534 aaPredicted RBP23.52■■□□□ 1.36
SPAST-204ENST00000621856 MKNK1Q9BUB5 465 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 KIFC3Q9BVG8 833 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 FAM207AQ9NSI2 230 aaPredicted RBP23.52■■□□□ 1.36
SPAST-204ENST00000621856 DMAC2Q9NW81 257 aa23.52■■□□□ 1.36
SPAST-204ENST00000621856 CGNQ9P2M7 1197 aaKnown RBP23.52■■□□□ 1.36
SPAST-204ENST00000621856 SOWAHDA6NJG2 315 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 AFPP02771 609 aaKnown RBP23.51■■□□□ 1.35
SPAST-204ENST00000621856 FECHP22830 423 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 RFC5P40937 340 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 ZBED6P86452 979 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 TMEM63BQ5T3F8 832 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 TCERG1LQ5VWI1 586 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 TAPT1Q6NXT6 567 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 SLC9A9Q8IVB4 645 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 TMEM161BQ8NDZ6 487 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 NEK11Q8NG66 645 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 SLC7A3Q8WY07 619 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 MAML3Q96JK9 1138 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 PPP1R13BQ96KQ4 1090 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 DHX33Q9H6R0 707 aaKnown RBP23.51■■□□□ 1.35
SPAST-204ENST00000621856 ZNF236Q9UL36 1845 aa23.51■■□□□ 1.35
SPAST-204ENST00000621856 A0A1W2PQJ5 194 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 DENND3A2RUS2 1198 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 EXOC3O60645 756 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 ECM2O94769 699 aaPredicted RBP23.5■■□□□ 1.35
SPAST-204ENST00000621856 MARK3P27448 753 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 MYBPC2Q14324 1141 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 CYP26C1Q6V0L0 522 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 TMTC1Q8IUR5 882 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 DNAJC7Q99615 494 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 AGPAT5Q9NUQ2 364 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 SLC5A4Q9NY91 659 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 TBX20Q9UMR3 447 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms