RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 CFAP157Q5JU67 520 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 KIAA0825Q8IV33 1275 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 SCFD2Q8WU76 684 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 C18orf8Q96DM3 657 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 RNPEPL1Q9HAU8 725 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 MKNK2Q9HBH9 465 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 DCTN4Q9UJW0 460 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 TRPC5Q9UL62 973 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 PCDHA4Q9UN74 947 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 SUGT1Q9Y2Z0 365 aa10.54□□□□□ -0.72
TNFAIP3-210ENST00000620204 OPHN1O60890 802 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 AGTP01019 485 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 PAEPP09466 180 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 RASSF2P50749 326 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZC3H12AQ5D1E8 599 aaKnown RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 KIAA1755Q5JYT7 1200 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 SUSD4Q5VX71 490 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 GALNT15Q8N3T1 639 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 C1orf131Q8NDD1 294 aaKnown RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 FAM81AQ8TBF8 368 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 LARP4BQ92615 738 aaKnown RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 DDX12PQ92771 950 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 GJA10Q969M2 543 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZNF652Q9Y2D9 606 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 NPHP3-ACAD11A0A0J9YXS1 232 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ANKRD62A6NC57 917 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 HNRNPH3P31942 346 aaKnown RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 MMP13P45452 471 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 PUM3Q15397 648 aaKnown RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ALX1Q15699 326 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 CNGA2Q16280 664 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ARHGAP44Q17R89 818 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 HP1BP3Q5SSJ5 553 aaPredicted RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 KRT79Q5XKE5 535 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZNF571Q7Z3V5 609 aaPredicted RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 LRP10Q7Z4F1 713 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 JAMLQ86YT9 394 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 STK32AQ8WU08 396 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 SP100P23497 879 aaPredicted RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 IL6STP40189 918 aaPredicted RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 BNIP1Q12981 228 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 TMEM266Q2M3C6 531 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 TBC1D25Q3MII6 688 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 CYP4F22Q6NT55 531 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 GJB7Q6PEY0 223 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZSCAN29Q8IWY8 852 aaPredicted RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 KLHL23Q8NBE8 558 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 DRAXINQ8NBI3 349 aaPredicted RBP10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 LRRC15Q8TF66 581 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 CTTNBP2NLQ9P2B4 639 aa10.53□□□□□ -0.72
TNFAIP3-210ENST00000620204 ATP9AO75110 1047 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 TPP2P29144 1249 aaPredicted RBP10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 PPP1R2P41236 205 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 CACNA2D1P54289 1103 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 KCNH2Q12809 1159 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 FAM26FQ5R3K3 315 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 SYCE1Q8N0S2 351 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZBTB38Q8NAP3 1195 aaPredicted RBP10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 LINC00116Q8NCU8 138 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 SNRNP27Q8WVK2 155 aaKnown RBP10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 TLCD1Q96CP7 247 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 NT5C3AQ9H0P0 336 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 RXFP1Q9HBX9 757 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.72
TNFAIP3-210ENST00000620204 BCL9O00512 1426 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 A6NHS1 94 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 THAP12O43422 761 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 SETSIPP0DME0 302 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 RCN1Q15293 331 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 SEC23AQ15436 765 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 NPY5RQ15761 445 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 EXOC3L4Q17RC7 722 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 LRRC36Q1X8D7 754 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 CENPPQ6IPU0 288 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 ISLR2Q6UXK2 745 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 FAM196AQ6ZSG2 479 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 HS2ST1Q7LGA3 356 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 ACTRT1Q8TDG2 376 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 KIFAP3Q92845 792 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 RBM41Q96IZ5 413 aaKnown RBP10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 NAGPAQ9UK23 515 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 BCS1LQ9Y276 419 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 ANKRD33BA6NCL7 494 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 CYP2D6P10635 497 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 GCLCP48506 637 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 TNNI2P48788 182 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 DIXDC1Q155Q3 683 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 ZNF365Q70YC5 407 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 EXOC3L1Q86VI1 746 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 SETDB2Q96T68 719 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 CCSER1Q9C0I3 900 aa10.52□□□□□ -0.73
TNFAIP3-210ENST00000620204 MYLK2Q9H1R3 596 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms