RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 SUCLA2Q9P2R7 463 aaPredicted RBP12.83□□□□□ -0.35
C11orf54-215ENST00000617482 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.35
C11orf54-215ENST00000617482 BCS1LQ9Y276 419 aa12.83□□□□□ -0.35
C11orf54-215ENST00000617482 STK24Q9Y6E0 443 aa12.83□□□□□ -0.35
C11orf54-215ENST00000617482 ZMYM2Q9UBW7 1377 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 GCOM1H8Y6P7 765 aaPredicted RBP12.83□□□□□ -0.36
C11orf54-215ENST00000617482 PPP1R12BO60237 982 aaPredicted RBP12.83□□□□□ -0.36
C11orf54-215ENST00000617482 MYZAPP0CAP1 466 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 GAP43P17677 238 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 FMO5P49326 533 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 MMP14P50281 582 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 ITGB3BPQ13352 177 aaPredicted RBP12.83□□□□□ -0.36
C11orf54-215ENST00000617482 PRPF4BQ13523 1007 aaKnown RBP12.83□□□□□ -0.36
C11orf54-215ENST00000617482 ARHGAP44Q17R89 818 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 RBM26Q5T8P6 1007 aaKnown RBP12.83□□□□□ -0.36
C11orf54-215ENST00000617482 SLC30A5Q8TAD4 765 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 TRIM31Q9BZY9 425 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 EPN3Q9H201 632 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 TMBIM4Q9HC24 238 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 NR2E1Q9Y466 385 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 LTBP1Q14766 1721 aa12.83□□□□□ -0.36
C11orf54-215ENST00000617482 A0A0A6YYK5 440 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-215ENST00000617482 GTPBP10A4D1E9 387 aaKnown RBP12.82□□□□□ -0.36
C11orf54-215ENST00000617482 HMGB1P1B2RPK0 211 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-215ENST00000617482 FGGP02679 453 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 CYP3A4P08684 503 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 MDH1P40925 334 aaKnown RBP12.82□□□□□ -0.36
C11orf54-215ENST00000617482 ECE1P42892 770 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 CCDC174Q6PII3 467 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 SYCE1Q8N0S2 351 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 HES6Q96HZ4 224 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 DPH5Q9H2P9 285 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 WRAP73Q9P2S5 460 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-215ENST00000617482 AMFRQ9UKV5 643 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 GREB1LQ9C091 1923 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-215ENST00000617482 H0YGN5 161 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 PPP1R37O75864 691 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 ERLIN2O94905 339 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 COPB2P35606 906 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 KIAA1755Q5JYT7 1200 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 ZNF720Q7Z2F6 126 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 RASGEF1CQ8N431 466 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 OLIG1Q8TAK6 271 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.82□□□□□ -0.36
C11orf54-215ENST00000617482 LRRC45Q96CN5 670 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 PLCD4Q9BRC7 762 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 STK33Q9BYT3 514 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 TAS2R14Q9NYV8 317 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 FRMD4BQ9Y2L6 1034 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 NFS1Q9Y697 457 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 SPATA31A6Q5VVP1 1343 aa12.82□□□□□ -0.36
C11orf54-215ENST00000617482 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 CCDC188H7C350 402 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 EIF3DO15371 548 aaKnown RBP eCLIP12.81□□□□□ -0.36
C11orf54-215ENST00000617482 GAS7O60861 476 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 PSMD10O75832 226 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 ANXA13P27216 316 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 ZNF844Q08AG5 666 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 SF3B2Q13435 895 aaKnown RBP12.81□□□□□ -0.36
C11orf54-215ENST00000617482 PTGISQ16647 500 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 ODR4Q5SWX8 454 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 HS2ST1Q7LGA3 356 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 CCDC26Q8TAB7 109 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 PPANQ9NQ55 473 aaKnown RBP12.81□□□□□ -0.36
C11orf54-215ENST00000617482 INTUQ9ULD6 942 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 ATAD5Q96QE3 1844 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 ECE2O60344 883 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 LRRN2O75325 713 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 LMNB1P20700 586 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 INPP5BP32019 993 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 ODF2Q5BJF6 829 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 EMC10Q5UCC4 262 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 BTNL9Q6UXG8 535 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 B4GALNT4Q76KP1 1039 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 PALB2Q86YC2 1186 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 EIF1ADQ8N9N8 165 aaKnown RBP12.81□□□□□ -0.36
C11orf54-215ENST00000617482 BANK1Q8NDB2 785 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 CTNNBL1Q8WYA6 563 aaPredicted RBP12.81□□□□□ -0.36
C11orf54-215ENST00000617482 ARHGEF26Q96DR7 871 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 HOOK2Q96ED9 719 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 CSRNP1Q96S65 589 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 CCT8L2Q96SF2 557 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 FIZ1Q96SL8 496 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 TRIM51Q9BSJ1 452 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 GPR88Q9GZN0 384 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 INTS2Q9H0H0 1204 aaKnown RBP12.81□□□□□ -0.36
C11orf54-215ENST00000617482 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 TUFT1Q9NNX1 390 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 AGPAT3Q9NRZ7 376 aa12.81□□□□□ -0.36
C11orf54-215ENST00000617482 E7EVH7 732 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 MYO1FO00160 1098 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 STAT2P52630 851 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms